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add 'cow-baited arthropod trap' #1618

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merged 3 commits into from
Nov 7, 2022
Merged

add 'cow-baited arthropod trap' #1618

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8295fa4
add 'capable of' to ebh
Oct 18, 2022
ee8b7f4
add 'cow-baited arthropod trap'
Oct 18, 2022
de4c5d2
Merge branch 'master' into issue-1602
jamesaoverton Nov 7, 2022
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24 changes: 24 additions & 0 deletions src/ontology/external-byhand.owl
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Expand Up @@ -198,6 +198,18 @@



<!-- http://purl.obolibrary.org/obo/RO_0002215 -->

<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002215">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000004"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/BFO_0000015"/>
<IAO_0000115>A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process.</IAO_0000115>
<IAO_0000118>has function realized in</IAO_0000118>
<rdfs:label>capable of</rdfs:label>
</owl:ObjectProperty>



<!-- http://purl.obolibrary.org/obo/RO_0002219 -->

<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002219">
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<!-- http://purl.obolibrary.org/obo/BFO_0000004 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000004"/>



<!-- http://purl.obolibrary.org/obo/BFO_0000015 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000015"/>



<!-- http://purl.obolibrary.org/obo/CLO_0000001 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/CLO_0000001">
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31 changes: 31 additions & 0 deletions src/ontology/modules/devices.owl
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Expand Up @@ -153,6 +153,12 @@



<!-- http://purl.obolibrary.org/obo/RO_0002215 -->

<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002215"/>



<!-- http://purl.obolibrary.org/obo/RO_0002219 -->

<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002219"/>
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<!-- http://purl.obolibrary.org/obo/OBI_0002913 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002913"/>



<!-- http://purl.obolibrary.org/obo/OBI_0002920 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0002920">
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<!-- http://purl.obolibrary.org/obo/OBI_0003481 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0003481">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000968"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0002215"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0002913"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A resting arthropod trap that consists of a tent inside which an adult cow is tethered to the ground, in order to attract arthropods and collect those that rest on the interior walls of the tent.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">John Judkins ORCID:0000-0001-6595-0902</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Sarah Kelly</obo:IAO_0000119>
<obo:IAO_0000233 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/obi-ontology/obi/issues/1602</obo:IAO_0000233>
<rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">cow-baited arthropod trap</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/OBI_0302886 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0302886"/>
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1 change: 1 addition & 0 deletions src/ontology/templates/devices.tsv
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Expand Up @@ -458,6 +458,7 @@ OBI:0003402 Illumina MouseRef-8 v2.0 beadchip Illumina MouseRef-8 v2.0 beadchip
OBI:0003403 Affymetrix Mouse Exon Junction Array Affymetrix Mouse Exon Junction Array A DNA microarray manufactured by Affymetrix, used to identify exon-exon junctions associated with alternate splice variants in the mouse transcriptome. https://academic.oup.com/bioinformatics/article/26/2/268/209989 Jain Aluvathingal|Michelle Giglio|Suvarna Nadendla gEAR https://github.com/obi-ontology/obi/issues/1546 DNA microarray Affymetrix
OBI:0003404 Affymetrix Human Exon Junction Array Affymetrix Human Exon Junction Array A DNA microarray manufactured by Affymetrix, used to identify exon-exon junctions associated with alternate splice variants in the human transcriptome. https://academic.oup.com/bioinformatics/article/26/2/268/209989 Jain Aluvathingal|Michelle Giglio|Suvarna Nadendla gEAR https://github.com/obi-ontology/obi/issues/1546 DNA microarray Affymetrix
OBI:0003454 Mosquito Magnet Liberty Plus trap An arthropod trap that is designed to emit a combination of carbon dioxide, heat, water, and oct-1-en-3-ol attractants while simultaneously using suction to trap arthropods. This trap has the same design as the Mosquito Magnet Pro trap but is smaller, is more lightweight, and uses a main line electricity supply instead of propane to power itself. Both use propane to produce the arthropod attractor. VEuPathDB https://github.com/obi-ontology/obi/issues/1523 arthropod trap
OBI:0003481 cow-baited arthropod trap A resting arthropod trap that consists of a tent inside which an adult cow is tethered to the ground, in order to attract arthropods and collect those that rest on the interior walls of the tent. Sarah Kelly John Judkins ORCID:0000-0001-6595-0902 https://github.com/obi-ontology/obi/issues/1602 device 'capable of' some 'arthropod specimen collection process'
OBI:0400005 A10-Analyzer A10-Analyzer ready for release A A10 is a flow_cytometer_analyser manufactured by Apogee. It uses an arc lamp as a light source, with choices of 75W Xe, 75W Xe/Hg or 100W Hg arc lamps. It has filters and collectors for up to three fluorescent parameters and two scatter parameters. It uses analog electronics. The A10 can be used for measuring the properties of individual cells. http://www.apogeeflow.com/flow_cytometry_products.htm John Quinn flow cytometer analyzer
OBI:0400006 A40-MiniFCM A40-MiniFCM ready for release A A40-MiniFCM is a flow_cytometer_analyser that allows for the choice of one of four lasers (375nm, 405nm,488nm, 532nm, 635nm), and PMTs and filters for collecting up to four parameters. It uses digital electronics. A military version of this cytometer is available as well. The A40-MiniFCM is geared towards the most demanding applications such as archaea, bacteria and large virus. http://www.apogeeflow.com/flow_cytometry_products.htm John Quinn flow cytometer analyzer
OBI:0400007 analog-to-digital converter analog-to-digital converter metadata incomplete A2D|A-D An analog-to-digital_converter is an instrument that converts an infinite resolution analog signal to a finite resolution digital signal. http://en.wiktionary.org/wiki/Analog-to-Digital_Converter The analog to digital converter transformed the analog output from the photomultiplier tube to a digital signal for collection. John Quinn|Melanie Courtot device signal conversion function
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