Merge pull request galaxyproject#17333 from galaxybot/dev_auto_update…

…_dependencies

Update Python dependencies

lib/galaxy/dependencies/dev-requirements.txt

@@ -11,7 +11,7 @@ babel==2.14.0 ; python_version >= "3.8" and python_version < "3.13"
 backports-zoneinfo==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
 backports-zoneinfo[tzdata]==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
 billiard==4.2.0 ; python_version >= "3.8" and python_version < "3.13"
-black==23.12.1 ; python_version >= "3.8" and python_version < "3.13"
+black==24.1.0 ; python_version >= "3.8" and python_version < "3.13"
 build==1.0.3 ; python_version >= "3.8" and python_version < "3.13"
 cachecontrol[filecache]==0.13.1 ; python_version >= "3.8" and python_version < "3.13"
 celery==5.3.6 ; python_version >= "3.8" and python_version < "3.13"
@@ -25,8 +25,8 @@ click==8.1.7 ; python_version >= "3.8" and python_version < "3.13"
 codespell==2.2.6 ; python_version >= "3.8" and python_version < "3.13"
 colorama==0.4.6 ; python_version >= "3.8" and python_version < "3.13" and (sys_platform == "win32" or platform_system == "Windows" or os_name == "nt")
 contourpy==1.1.1 ; python_version >= "3.8" and python_version < "3.13"
-coverage[toml]==7.4.0 ; python_version >= "3.8" and python_version < "3.13"
-cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.13"
+coverage[toml]==7.4.1 ; python_version >= "3.8" and python_version < "3.13"
+cryptography==42.0.1 ; python_version >= "3.8" and python_version < "3.13"
 cwltest==2.4.20231222081524 ; python_version >= "3.8" and python_version < "3.13"
 cycler==0.12.1 ; python_version >= "3.8" and python_version < "3.13"
 darker==1.7.2 ; python_version >= "3.8" and python_version < "3.13"
@@ -36,10 +36,10 @@ docutils==0.18.1 ; python_version >= "3.8" and python_version < "3.13"
 exceptiongroup==1.2.0 ; python_version >= "3.8" and python_version < "3.11"
 filelock==3.13.1 ; python_version >= "3.8" and python_version < "3.13"
 fluent-logger==0.10.0 ; python_version >= "3.8" and python_version < "3.13"
-fonttools==4.47.0 ; python_version >= "3.8" and python_version < "3.13"
+fonttools==4.47.2 ; python_version >= "3.8" and python_version < "3.13"
 frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.13"
 galaxy-release-util==0.1.5 ; python_version >= "3.8" and python_version < "3.13"
-greenlet==3.0.1 ; python_version >= "3.8" and python_version < "3.13"
+greenlet==3.0.3 ; python_version >= "3.8" and python_version < "3.13"
 h11==0.14.0 ; python_version >= "3.8" and python_version < "3.13"
 httpcore==1.0.2 ; python_version >= "3.8" and python_version < "3.13"
 httpx==0.26.0 ; python_version >= "3.8" and python_version < "3.13"
@@ -52,22 +52,22 @@ isodate==0.6.1 ; python_version >= "3.8" and python_version < "3.13"
 isort==5.13.2 ; python_version >= "3.8" and python_version < "3.13"
 jaraco-classes==3.3.0 ; python_version >= "3.8" and python_version < "3.13"
 jeepney==0.8.0 ; python_version >= "3.8" and python_version < "3.13" and sys_platform == "linux"
-jinja2==3.1.2 ; python_version >= "3.8" and python_version < "3.13"
+jinja2==3.1.3 ; python_version >= "3.8" and python_version < "3.13"
 junit-xml==1.9 ; python_version >= "3.8" and python_version < "3.13"
 keyring==24.3.0 ; python_version >= "3.8" and python_version < "3.13"
 kiwisolver==1.4.5 ; python_version >= "3.8" and python_version < "3.13"
-kombu==5.3.4 ; python_version >= "3.8" and python_version < "3.13"
+kombu==5.3.5 ; python_version >= "3.8" and python_version < "3.13"
 lxml==4.9.4 ; python_version >= "3.8" and python_version < "3.13"
 markdown-it-py==3.0.0 ; python_version >= "3.8" and python_version < "3.13"
 markdown-it-reporter==0.0.2 ; python_version >= "3.8" and python_version < "3.13"
-markupsafe==2.1.3 ; python_version >= "3.8" and python_version < "3.13"
+markupsafe==2.1.4 ; python_version >= "3.8" and python_version < "3.13"
 matplotlib==3.7.4 ; python_version >= "3.8" and python_version < "3.9"
 matplotlib==3.8.2 ; python_version >= "3.9" and python_version < "3.13"
 mdit-py-plugins==0.4.0 ; python_version >= "3.8" and python_version < "3.13"
 mdurl==0.1.2 ; python_version >= "3.8" and python_version < "3.13"
 mirakuru==2.5.2 ; python_version >= "3.8" and python_version < "3.13"
 mistune==2.0.5 ; python_version >= "3.8" and python_version < "3.13"
-more-itertools==10.1.0 ; python_version >= "3.8" and python_version < "3.13"
+more-itertools==10.2.0 ; python_version >= "3.8" and python_version < "3.13"
 msgpack==1.0.7 ; python_version >= "3.8" and python_version < "3.13"
 multidict==6.0.4 ; python_version >= "3.8" and python_version < "3.13"
 mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.13"
@@ -82,13 +82,13 @@ pillow==10.2.0 ; python_version >= "3.8" and python_version < "3.13"
 pkce==1.0.3 ; python_version >= "3.8" and python_version < "3.13"
 pkginfo==1.9.6 ; python_version >= "3.8" and python_version < "3.13"
 platformdirs==4.1.0 ; python_version >= "3.8" and python_version < "3.13"
-playwright==1.40.0 ; python_version >= "3.8" and python_version < "3.13"
-pluggy==1.3.0 ; python_version >= "3.8" and python_version < "3.13"
+playwright==1.41.1 ; python_version >= "3.8" and python_version < "3.13"
+pluggy==1.4.0 ; python_version >= "3.8" and python_version < "3.13"
 port-for==0.7.2 ; python_version >= "3.8" and python_version < "3.13"
 prettytable==3.9.0 ; python_version >= "3.8" and python_version < "3.13"
 prompt-toolkit==3.0.43 ; python_version >= "3.8" and python_version < "3.13"
-psutil==5.9.7 ; python_version >= "3.8" and python_version < "3.13" and sys_platform != "cygwin"
-psycopg==3.1.16 ; python_version >= "3.8" and python_version < "3.13"
+psutil==5.9.8 ; python_version >= "3.8" and python_version < "3.13" and sys_platform != "cygwin"
+psycopg==3.1.17 ; python_version >= "3.8" and python_version < "3.13"
 pycparser==2.21 ; python_version >= "3.8" and python_version < "3.13"
 pyee==11.0.1 ; python_version >= "3.8" and python_version < "3.13"
 pygithub==2.1.1 ; python_version >= "3.8" and python_version < "3.13"
@@ -113,7 +113,7 @@ pytest-shard==0.1.2 ; python_version >= "3.8" and python_version < "3.13"
 pytest==7.4.4 ; python_version >= "3.8" and python_version < "3.13"
 python-dateutil==2.8.2 ; python_version >= "3.8" and python_version < "3.13"
 python-irodsclient==1.1.9 ; python_version >= "3.8" and python_version < "3.13"
-python-slugify==8.0.1 ; python_version >= "3.8" and python_version < "3.13"
+python-slugify==8.0.2 ; python_version >= "3.8" and python_version < "3.13"
 pytz==2023.3.post1 ; python_version >= "3.8" and python_version < "3.9"
 pywin32-ctypes==0.2.2 ; python_version >= "3.8" and python_version < "3.13" and sys_platform == "win32"
 pyyaml==6.0.1 ; python_version >= "3.8" and python_version < "3.13"
@@ -128,9 +128,9 @@ ruamel-yaml-clib==0.2.8 ; platform_python_implementation == "CPython" and python
 ruamel-yaml==0.18.5 ; python_version >= "3.8" and python_version < "3.13"
 schema-salad==8.5.20240102191335 ; python_version >= "3.8" and python_version < "3.13"
 scipy==1.10.1 ; python_version >= "3.8" and python_version < "3.9"
-scipy==1.11.4 ; python_version >= "3.9" and python_version < "3.13"
+scipy==1.12.0 ; python_version >= "3.9" and python_version < "3.13"
 secretstorage==3.3.3 ; python_version >= "3.8" and python_version < "3.13" and sys_platform == "linux"
-selenium==4.16.0 ; python_version >= "3.8" and python_version < "3.13"
+selenium==4.17.2 ; python_version >= "3.8" and python_version < "3.13"
 seletools==1.4.0 ; python_version >= "3.8" and python_version < "3.13"
 setuptools==69.0.3 ; python_version >= "3.8" and python_version < "3.13"
 six==1.16.0 ; python_version >= "3.8" and python_version < "3.13"
@@ -153,7 +153,7 @@ tinydb==4.8.0 ; python_version >= "3.8" and python_version < "3.13"
 toml==0.10.2 ; python_version >= "3.8" and python_version < "3.13"
 tomli==2.0.1 ; python_version >= "3.8" and python_full_version <= "3.11.0a6"
 trio-websocket==0.11.1 ; python_version >= "3.8" and python_version < "3.13"
-trio==0.23.2 ; python_version >= "3.8" and python_version < "3.13"
+trio==0.24.0 ; python_version >= "3.8" and python_version < "3.13"
 tuspy==1.0.3 ; python_version >= "3.8" and python_version < "3.13"
 twill==3.2.1 ; python_version >= "3.8" and python_version < "3.13"
 twine==4.0.2 ; python_version >= "3.8" and python_version < "3.13"

lib/galaxy/dependencies/pinned-lint-requirements.txt

@@ -1,7 +1,7 @@
 attrs==23.2.0
 flake8==7.0.0
-flake8-bugbear==23.12.2
+flake8-bugbear==24.1.17
 mccabe==0.7.0
 pycodestyle==2.11.1
 pyflakes==3.2.0
-ruff==0.1.11
+ruff==0.1.14