Update GitHub action versions

nsoranzo · Oct 17, 2022 · 2988127 · 2988127
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commit 2988127
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Showing 19 changed files with 27 additions and 27 deletions.
diff --git a/.github/workflows/api.yaml b/.github/workflows/api.yaml
@@ -47,7 +47,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -67,7 +67,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage --skip_flakey_fails -api lib/galaxy_test/api -- --num-shards=2 --shard-id=${{ matrix.chunk }}
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: api
           working-directory: 'galaxy root'

diff --git a/.github/workflows/converter_tests.yaml b/.github/workflows/converter_tests.yaml
@@ -36,7 +36,7 @@ jobs:
       with:
         repository: galaxyproject/galaxy-test-data
         path: galaxy-test-data
-    - uses: actions/setup-python@v3
+    - uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
     - name: Cache venv dir

diff --git a/.github/workflows/cwl_conformance.yaml b/.github/workflows/cwl_conformance.yaml
@@ -38,7 +38,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -58,7 +58,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage --skip_flakey_fails -cwl lib/galaxy_test/api/cwl -- -m "${{ matrix.marker }} and ${{ matrix.conformance-version }}"
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: cwl-conformance
           working-directory: 'galaxy root'

diff --git a/.github/workflows/db_indexes.yaml b/.github/workflows/db_indexes.yaml
@@ -41,7 +41,7 @@ jobs:
     - uses: actions/checkout@v3
       with:
         path: 'galaxy root'
-    - uses: actions/setup-python@v3
+    - uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
     - name: Get full Python version

diff --git a/.github/workflows/dependencies.yaml b/.github/workflows/dependencies.yaml
@@ -12,7 +12,7 @@ jobs:
         python-version: ['3.7']
     steps:
       - uses: actions/checkout@v3
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Cache pip dir

diff --git a/.github/workflows/docs.yaml b/.github/workflows/docs.yaml
@@ -29,7 +29,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Cache pip dir

diff --git a/.github/workflows/first_startup.yaml b/.github/workflows/first_startup.yaml
@@ -30,7 +30,7 @@ jobs:
       with:
         path: 'galaxy root'
     - name: Set up Python
-      uses: actions/setup-python@v3
+      uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
     - name: Get full Python version

diff --git a/.github/workflows/framework.yaml b/.github/workflows/framework.yaml
@@ -43,7 +43,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -63,7 +63,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage --framework
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: framework
           working-directory: 'galaxy root'

diff --git a/.github/workflows/integration.yaml b/.github/workflows/integration.yaml
@@ -67,7 +67,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -92,7 +92,7 @@ jobs:
           . .ci/minikube-test-setup/start_services.sh
           ./run_tests.sh --coverage -integration test/integration -- --num-shards=4 --shard-id=${{ matrix.chunk }}
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: integration
           working-directory: 'galaxy root'

diff --git a/.github/workflows/integration_selenium.yaml b/.github/workflows/integration_selenium.yaml
@@ -46,7 +46,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -70,7 +70,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage -integration test/integration_selenium
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: integration-selenium
           working-directory: 'galaxy root'

diff --git a/.github/workflows/lint.yaml b/.github/workflows/lint.yaml
@@ -24,7 +24,7 @@ jobs:
         python-version: ['3.7', '3.10']
     steps:
       - uses: actions/checkout@v3
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -50,4 +50,4 @@ jobs:
       - name: Run mypy checks
         run: tox -e mypy
       - uses: psf/black@stable
-      - uses: jamescurtin/isort-action@master
+      - uses: isort/isort-action@master
diff --git a/.github/workflows/mulled.yaml b/.github/workflows/mulled.yaml
@@ -24,7 +24,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version

diff --git a/.github/workflows/performance.yaml b/.github/workflows/performance.yaml
@@ -42,7 +42,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version

diff --git a/.github/workflows/reports_startup.yaml b/.github/workflows/reports_startup.yaml
@@ -27,7 +27,7 @@ jobs:
       with:
         path: 'galaxy root'
     - name: Set up Python
-      uses: actions/setup-python@v3
+      uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
     - name: Get full Python version

diff --git a/.github/workflows/selenium.yaml b/.github/workflows/selenium.yaml
@@ -46,7 +46,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -70,7 +70,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage -selenium lib/galaxy_test/selenium -- --num-shards=3 --shard-id=${{ matrix.chunk }}
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: selenium
           working-directory: 'galaxy root'

diff --git a/.github/workflows/test_galaxy_packages.yaml b/.github/workflows/test_galaxy_packages.yaml
@@ -23,7 +23,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Cache pip dir

diff --git a/.github/workflows/toolshed.yaml b/.github/workflows/toolshed.yaml
@@ -34,7 +34,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version

diff --git a/.github/workflows/unit-postgres.yaml b/.github/workflows/unit-postgres.yaml
@@ -36,7 +36,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version

diff --git a/.github/workflows/unit.yaml b/.github/workflows/unit.yaml
@@ -25,7 +25,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           path: 'galaxy root'
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Get full Python version
@@ -47,7 +47,7 @@ jobs:
       - name: Run tests
         run: ./run_tests.sh --coverage -u
         working-directory: 'galaxy root'
-      - uses: codecov/codecov-action@v2
+      - uses: codecov/codecov-action@v3
         with:
           flags: py-unit
           working-directory: 'galaxy root'