initial quarto files commit

.github/workflows/publish.yaml

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+on:
+  push:
+    branches:
+      - main
+
+name: Render and Publish
+
+# you need these permissions to publish to GitHub pages
+permissions: 
+    contents: write
+    pages: write
+
+jobs:
+  build-deploy:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+
+      - name: Set up Quarto
+        uses: quarto-dev/quarto-actions/setup@v2
+        with:
+          # To install LaTeX to build PDF book 
+          tinytex: true 
+          # uncomment below and fill to pin a version
+          # version: SPECIFIC-QUARTO-VERSION-HERE
+
+      # From https://github.com/actions/setup-python
+      - name: Setup Python
+        uses: actions/setup-python@v3
+
+      - name: Render and Publish
+        uses: quarto-dev/quarto-actions/publish@v2
+        with:
+          target: gh-pages
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.gitignore

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+/.quarto/
+docs
+

_extensions/quarto-journals/agu/_extension.yml

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+title: AGU Journals Template
+author: Charles Teague
+version: 0.1.0
+contributes:
+  formats:
+    common:
+      knitr:
+        opts_chunk:
+          echo: false
+      number-sections: true
+      csl: american-geophysical-union.csl
+      filters:
+        - agu.lua
+    pdf:
+      documentclass: agujournal2019
+      classoptions: draft
+      header-includes: |
+        \usepackage{url} %this package should fix any errors with URLs in refs.
+        \usepackage{lineno}
+        \usepackage[inline]{trackchanges} %for better track changes. finalnew option will compile document with changes incorporated.
+        \usepackage{soul}
+        \linenumbers
+      template-partials:
+        - "partials/title.tex"
+        - "partials/_authors.tex"
+        - "partials/before-body.tex"
+        - "partials/_affiliations.tex"
+        - "partials/_corresponding-author.tex"
+      format-resources:
+        - agujournal2019.cls
+        - trackchanges.sty
+    html:
+      toc: true

_extensions/quarto-journals/agu/agu.lua

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+
+
+if quarto.doc.is_format("pdf") then
+return { 
+  {
+    Div = function(div)
+      if div.identifier == 'refs' then
+        div.content:insert(pandoc.RawBlock('latex', '\\vspace{1em}'))
+        return div
+      end
+    end
+  }
+}
+end