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@@ -11,7 +11,7 @@ Whenever possible, we tried to employ the same versions of the softwares as in H
## Major differences with the original pipeline:
- The script removePrecursor.pl was substituted with a modified version of the script [removePrecursor_new.pl](https://github.com/hexavier/tRNA_mapping/blob/master/removePrecursor.pl), kindly provided by Xavier Hernandez, due to a bug in dealing with intron-containing tRNA genes.
- The script removePrecursor.pl was substituted with a modified version of the script [removePrecursor_new.pl](https://github.com/hexavier/tRNA_mapping/blob/master/removePrecursor.pl), kindly provided by Xavier Hernandez (https://github.com/hexavier), due to a bug in dealing with intron-containing tRNA genes.
- We use 15nt minimum read length for the trimming
