FIX: Remove accidental MRIQC dependency, allow app config to be passed to workflow plugin #876
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mgxd
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Jun 20, 2024
mgxd
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Jul 31, 2024
1.11.0 (July 31, 2024) New minor release to start the 1.11.x series. The major changes include: - a deprecation to T1w-only based template processing - addition of a new dependency ``acres`` for accessing package data However, this is still backwards compatible with the 1.10.x series. * MAINT: Depend on acres for data access * ENH: Add PrepareDerivative/SaveDerivative interfaces (#885) * ENH: Make template dimensions support T2w as well (#879) * ENH: Modify FSSource to output T2 (#868) * FIX: Set cal_max in the NIfTI header for visualization after ``IntensityClip`` (#878) * FIX: Remove accidental MRIQC dependency, allow app config to be passed to workflow plugin (#876) * TEST: Fix plugin invocation, use an initializer that can be verified (#880)
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Reverted some uses of
configto the nipype config, which an app should generally be injecting into the nipype workflow config.Some parts don't exist, so I'm allowing an app config to be passed as a plugin argument "app_config", and falling back to nipype defaults or trivial replacements.
Closes #875.