Update to pydicom 3.0

Address deprecation warnings.
niaid · Oct 2, 2024 · a658847 · a658847
1 parent b3fd3a5
commit a658847
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/rap_sitkcore/read_dcm.py b/rap_sitkcore/read_dcm.py
@@ -36,7 +36,7 @@ def _read_dcm_pydicom(filename: Path) -> sitk.Image:
         img = sitk.GetImageFromArray(~arr, isVector=False)
     elif ds.PhotometricInterpretation in ["YBR_FULL_422", "YBR_FULL", "RGB"]:
         if ds.PhotometricInterpretation != "RGB":
-            from pydicom.pixel_data_handlers.util import convert_color_space
+            from pydicom.pixels import convert_color_space
 
             arr = convert_color_space(ds.pixel_array, ds.PhotometricInterpretation, "RGB")
 

diff --git a/requirements.txt b/requirements.txt
@@ -1,7 +1,7 @@
 SimpleITK >=2.1.0, <2.5.0
 
 numpy
-pydicom
+pydicom>=3.0.0
 requests>=2.31.0
 
 # additional packages for pydicom to expand supported files