Update docs to directly push to pages. #146
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name: Python Test and Package | ||
on: | ||
push: | ||
branches: | ||
- main | ||
tags: | ||
- 'v*' | ||
pull_request: | ||
branches: | ||
- main | ||
jobs: | ||
linting: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
- name: Set up Python 3.11 | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: 3.11 | ||
- name: set PY | ||
run: echo "PY=$(python -VV | sha256sum | cut -d' ' -f1)" >> $GITHUB_ENV | ||
- uses: actions/cache@v4 | ||
with: | ||
path: ~/.cache/pre-commit | ||
key: pre-commit|${{ env.PY }}|${{ hashFiles('.pre-commit-config.yaml') }} | ||
- name: Linting | ||
run: | | ||
pip install pre-commit | ||
pre-commit run --all-files | ||
test: | ||
needs: linting | ||
runs-on: ubuntu-latest | ||
strategy: | ||
matrix: | ||
python-version: ['3.8', '3.9', '3.10', '3.11'] | ||
steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
- name: Create LFS file list | ||
run: | | ||
git lfs ls-files -l | cut -d' ' -f1 | sort > .lfs-assets-id | ||
- name: Restore LFS cache | ||
uses: actions/cache@v4 | ||
id: lfs-cache | ||
with: | ||
path: .git/lfs | ||
key: lfs-v1-${{ hashFiles('.lfs-assets-id') }} | ||
restore-keys: | ||
lfs-v1- | ||
- name: Git LFS Pull | ||
run: | | ||
git lfs pull | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
pip install -e .[pylibjpeg,dev] | ||
- name: Test with pytest | ||
run: | | ||
python -m pytest | ||
package: | ||
needs: test | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
- name: Create LFS file list | ||
run: | | ||
git lfs ls-files -l | cut -d' ' -f1 | sort > .lfs-assets-id | ||
- name: Restore LFS cache | ||
uses: actions/cache@v4 | ||
id: lfs-cache | ||
with: | ||
path: .git/lfs | ||
key: lfs-v1-${{ hashFiles('.lfs-assets-id') }} | ||
restore-keys: | ||
lfs-v1- | ||
- name: Git LFS Pull | ||
run: | | ||
git lfs pull | ||
- name: Set up Python 3.11 | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: 3.11 | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
python -m pip install build twine | ||
- name: Build package | ||
run: | | ||
python -m build --wheel --sdist | ||
python -m twine check dist/* | ||
ls -la dist | ||
- name: Upload package | ||
if: github.event_name == 'push' | ||
uses: actions/upload-artifact@v4 | ||
with: | ||
name: python-packages | ||
path: dist | ||
github_publish: | ||
if: startsWith(github.ref, 'refs/tags/v') | ||
needs: package_docs | ||
runs-on: ubuntu-latest | ||
steps: | ||
- name: Set up Python 3.11 | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: 3.11 | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
python -m pip install twine | ||
- uses: actions/download-artifact@v4 | ||
id: download | ||
with: | ||
name: python-packages | ||
- name: Create Release and Upload | ||
if: startsWith(github.ref, 'refs/tags/v') | ||
id: create_release | ||
env: | ||
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
run: | | ||
gh release create ${{ github.ref_name }} --repo ${{ github.repository }} --verify-tag --generate-notes --title "Release ${{ github.ref_name }}" | ||
gh release upload ${{ github.ref_name }} --repo ${{ github.repository }} ${{ steps.download.outputs.download-path }}/rap_sitkcore* | ||
- name: bcbb-pypi upload | ||
run: | | ||
python -m twine check ${{steps.download.outputs.download-path}}/* | ||
python -m twine upload ${{steps.download.outputs.download-path}}/* | ||
env: | ||
TWINE_REPOSITORY_URL: https://artifactory.niaid.nih.gov/artifactory/api/pypi/bcbb-pypi | ||
TWINE_PASSWORD: ${{secrets.BCBB_PYPI_PASSWORD}} | ||
TWINE_USERNAME: ${{secrets.BCBB_PYPI_USERNAME}} |