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Pull requests: nf-core/modules

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Pull requests list

Bcl2fastq bump
#7161 opened Dec 4, 2024 by edmundmiller • Draft
@edmundmiller
Fix stub run trimmomatic
#7160 opened Dec 4, 2024 by kiei-rz Loading…
17 tasks
Proovframe update
#7158 opened Dec 4, 2024 by Ge94 Loading…
17 tasks
[WIP] Cellranger v9 modules
#7153 opened Dec 4, 2024 by apeltzer Loading…
17 tasks
Add HOMER Uniqmap tests
#7143 opened Dec 3, 2024 by edmundmiller Loading…
@edmundmiller
Update ampcombi 2.0.1
#7142 opened Dec 2, 2024 by Darcy220606 Loading…
11 of 16 tasks
4
Fix nf-test workflow triggers
#7137 opened Dec 2, 2024 by adamrtalbot Loading…
Update biocontainers/chromap Docker tag to v0.2.7
#7135 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
Update biocontainers/chewbbaca Docker tag to v3.3.10
#7134 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
Update biocontainers/checkv Docker tag to v1.0.3
#7133 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
Update biocontainers/bowtie2 Docker tag to v2.5.3
#7132 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
Update biocontainers/agat Docker tag to v1.4.1
#7131 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
Update biocontainers/abritamr Docker tag to v1.0.19
#7130 opened Dec 1, 2024 by renovate bot Loading…
2 tasks
1
Update main.nf
#7120 opened Nov 29, 2024 by amizeranschi Loading…
1
1
Add sylph/profile module
#7118 opened Nov 28, 2024 by sofstam Loading…
17 tasks
Pyrodigal - add --jobs flag for multi-threaded operation, bump version Ready for Review
#7116 opened Nov 28, 2024 by prototaxites Loading…
4 of 17 tasks
2
Iterate differential
#7115 opened Nov 28, 2024 by pinin4fjords Loading…
17 tasks
16
ci: Update module_name filter step
#7106 opened Nov 27, 2024 by edmundmiller • Draft
@edmundmiller
3
Sarek wave ARM test
#7102 opened Nov 26, 2024 by edmundmiller • Draft
@edmundmiller
ci: Let wave fail
#7101 opened Nov 26, 2024 by edmundmiller • Draft
@edmundmiller
8
Check for new version snapshotting
#7098 opened Nov 26, 2024 by edmundmiller • Draft
1
@edmundmiller
1
Add Renovate env comment linting
#7090 opened Nov 25, 2024 by edmundmiller Loading…
1
@edmundmiller
style: Add hadolint hook for Dockerfiles
#7087 opened Nov 25, 2024 by edmundmiller Loading…
@edmundmiller
1
Add pre-commit hook to validate environment.ymls
#7086 opened Nov 25, 2024 by edmundmiller Loading… Wave/Seqera Containers Migration
@edmundmiller
1
style: Sort environment.yml dependencies
#7085 opened Nov 25, 2024 by edmundmiller Loading… Wave/Seqera Containers Migration
@edmundmiller
3
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