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MetaEuk doesn't work with databases created using the commands metaeuk createdb or mmseqs createdb #721

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amizeranschi opened this issue Dec 2, 2024 · 1 comment
Open

MetaEuk doesn't work with databases created using the commands metaeuk createdb or mmseqs createdb #721

amizeranschi opened this issue Dec 2, 2024 · 1 comment
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@amizeranschi
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The current pipeline version (3.2.1) doesn't support running MetaEuk when supplying a database (via ) created with the commands metaeuk createdb or mmseqs createdb ran on a manually downloaded FASTA with protein sequences. The MetaEuk module is searching for a file called <prefix>.version, which isn't created automatically by the previous commands.

Relevant discussion on Slack: https://nfcore.slack.com/archives/CE9MS66BS/p1733150568097039?thread_ts=1733144901.017309&cid=CE9MS66BS
@amizeranschi amizeranschi added the bug Something isn't working label Dec 2, 2024
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jfy133 commented Dec 3, 2024 •
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Ugh this looks like it's related to mmseqs which I really don't like atm for similar reasons 😬 , I will investigate ASAP

@jfy133 jfy133 self-assigned this Dec 3, 2024
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