nextclade: switch fields in pathogen json from gene to cds

nextstrain · Jan 24, 2024 · 9490445 · 9490445
1 parent fd5c40e
commit 9490445
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/nextclade/config/pathogen.json b/nextclade/config/pathogen.json
@@ -11,7 +11,7 @@
     "cli": "3.0.0-alpha.0",
     "web": "3.0.0-alpha.0"
   },
-  "defaultGene": "F",
+  "defaultCds": "F",
   "files": {
     "changelog": "CHANGELOG.md",
     "examples": "sequences.fasta",
@@ -53,7 +53,7 @@
       "ignoredStopCodons": []
     }
   },
-  "geneOrderPreference": [
+  "cdsOrderPreference": [
     "F",
     "G",
     "L"