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Cleanup datasets #95

Merged
merged 2 commits into from
Oct 2, 2023
Merged

Cleanup datasets #95

merged 2 commits into from
Oct 2, 2023

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ivan-aksamentov
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@ivan-aksamentov ivan-aksamentov commented Oct 2, 2023

Here I cleanup datasets:

  • If I don't recognize a dataset or if I know that it is incorrect, I remove it
  • I give friendly names to the remaining datasets, mostly according to what's written in their reference fasta file.
  • I try to make directory structure and naming a little more consistent (it is now reflected in the dataset path which is used as an identifier of the dataset in many places exposed to the end user).

This is mostly a "cosmetic" change, needed for testing usability of the current Nextclade Web UI and for making it prettier.

I have little knowledge in most of these pathogens, so this PR can be rolled back and the reorganization can be done properly by a scientists later.

Here I cleanup datasets:
-  If I don't recognize a dataset or if I know that it is incorrect, I removed it.
- I give friendly names to the remaining datasets, mostly according to what's written in their reference fasta file.
- I try to make directory structure and naming a little more consistent (it is now reflected in the dataset `path` which is used as an identifier of the dataset in many places exposed to the end user).

This is mostly a "cosmetic" change, needed for testing usability of the current Nextclade Web UI and for making it prettier.

I have little knowledge in most of these pathogens, so this PR can be rolled back and the reorganization can be done properly by a scientists later.
@ivan-aksamentov ivan-aksamentov merged commit cb1d7ea into master Oct 2, 2023
@ivan-aksamentov ivan-aksamentov deleted the cleanup-datasets branch October 2, 2023 16:13
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2 participants