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Add measurements types #1775

Add measurements types

Add measurements types #1775

Workflow file for this run

on:
push:
branches:
- master
- release
pull_request:
workflow_dispatch:
name: ci
jobs:
unit-test:
runs-on: ubuntu-latest
strategy:
matrix:
node: [16, 18, 20, 22]
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: ${{ matrix.node }}
- run: node --version
# Note: --ignore-scripts skips an otherwise unnecessary Auspice build, but
# also skips life cycle scripts for dependencies. If the job fails here,
# try removing this flag.
- run: npm ci --loglevel verbose --ignore-scripts
- run: npm test
build-and-smoke-test:
runs-on: ubuntu-latest
strategy:
matrix:
node: [16, 18, 20, 22]
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: ${{ matrix.node }}
# Build is implicit with the "prepare" life cycle script
- run: npm ci --loglevel verbose
- run: npm run get-data
- run: npx playwright install chromium
- run: npm run smoke-test
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: 18
# Note: --ignore-scripts skips an otherwise unnecessary Auspice build, but
# also skips life cycle scripts for dependencies. If the job fails here,
# try removing this flag.
- run: npm ci --loglevel verbose --ignore-scripts
- run: npm run lint
type-check:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: 18
# Note: --ignore-scripts skips an otherwise unnecessary Auspice build, but
# also skips life cycle scripts for dependencies. If the job fails here,
# try removing this flag.
- run: npm ci --loglevel verbose --ignore-scripts
- run: npm run type-check
bundlesize:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: 18
- run: npm ci --loglevel verbose
- run: npx --yes bundlesize
# Ensure package-lock.json is synced with package.json.
check-lockfile:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
# Node.js version doesn't matter; npm version is more important when
# it comes to lockfiles.
node-version: 18
- run: npm install -g npm@8
- run: npm install --ignore-scripts
- run: |
if git diff --exit-code package-lock.json; then
echo "package-lock.json is up to date." >&2
else
echo "package-lock.json needs updating. Please run 'npm install --ignore-scripts' locally and commit the changes." >&2
exit 1
fi
publish:
if: ${{ github.ref == 'refs/heads/release' }}
needs: [build-and-smoke-test, unit-test, lint, type-check, check-lockfile]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-node@v4
with:
node-version: 18
registry-url: https://registry.npmjs.org/
- run: node --version
- run: npm ci --loglevel verbose
- run: npm publish
env:
NODE_AUTH_TOKEN: ${{ secrets.NPM_TOKEN }}
rebuild-docker-image:
needs: [publish]
runs-on: ubuntu-latest
steps:
- run: gh workflow run ci.yml --repo nextstrain/docker-base
env:
GITHUB_TOKEN: ${{ secrets.GH_TOKEN_NEXTSTRAIN_BOT_WORKFLOW_DISPATCH }}
build-docs:
uses: nextstrain/.github/.github/workflows/docs-ci.yaml@master
with:
docs-directory: docs/
environment-file: docs/conda.yml