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CI: Add new pathogens to pathogen-repo-ci #1704

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merged 2 commits into from
Dec 20, 2024
Merged

CI: Add new pathogens to pathogen-repo-ci #1704

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Remove extra whitespace
joverlee521 Dec 20, 2024
c9e2e05
CI: Add new pathogens to `pathogen-repo-ci`
joverlee521 Dec 20, 2024
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16 changes: 10 additions & 6 deletions .github/workflows/ci.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -45,14 +45,14 @@ jobs:
- '3.10'
- '3.11'
- '3.12'
biopython-version:
# list of Biopython versions with support for a new Python version
# from https://github.com/biopython/biopython/blob/master/NEWS.rst
biopython-version:
# list of Biopython versions with support for a new Python version
# from https://github.com/biopython/biopython/blob/master/NEWS.rst
- '1.80' # first to support Python 3.10 and 3.11
- '1.82' # first to support Python 3.12
- '' # latest
exclude:
# some older Biopython versions are incompatible with later Python versions
- '' # latest
exclude:
# some older Biopython versions are incompatible with later Python versions
- { biopython-version: '1.80', python-version: '3.12' }
defaults:
run:
Expand Down Expand Up @@ -114,7 +114,11 @@ jobs:
- lassa
- measles
- mpox
- oropouche
- rabies
- seasonal-cov
- wnv
- yellow-fever
- zika

name: pathogen-repo-ci (${{ matrix.pathogen }})
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