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[augur ancestral] arg parsing improvements #1855

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[augur ancestral] arg parsing improvements

[augur ancestral] arg parsing improvements #1855

Run time

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Job Run time
pathogen-repo-ci (avian-flu)
51s
test (python=3.8 biopython=1.76)
6m 43s
pathogen-repo-ci (ebola)
1m 1s
test (python=3.8 biopython=1.79)
6m 44s
pathogen-repo-ci (lassa)
55s
test (python=3.8 biopython=1.80)
6m 39s
pathogen-repo-ci (mumps)
1m 6s
test (python=3.8 biopython=latest)
7m 2s
pathogen-repo-ci (ncov)
1m 3s
test (python=3.9 biopython=1.79)
6m 44s
pathogen-repo-ci (rsv)
3m 9s
test (python=3.9 biopython=1.80)
6m 43s
pathogen-repo-ci (seasonal-flu)
1m 6s
test (python=3.9 biopython=latest)
7m 6s
pathogen-repo-ci (tb)
1m 22s
test (python=3.10 biopython=1.80)
6m 50s
pathogen-repo-ci (zika)
49s
test (python=3.10 biopython=latest)
6m 39s
test (python=3.11 biopython=1.80)
7m 12s
test (python=3.11 biopython=latest)
6m 58s
build-docs / build-conda
0s
build-docs / build-pip
51s
codecov
16s
1h 27m 49s