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Improve parsing of GenBank / GFF files #1852

Improve parsing of GenBank / GFF files

Improve parsing of GenBank / GFF files #1852

Triggered via pull request December 5, 2023 22:59
Status Failure
Total duration 7m 31s
Artifacts 9

ci.yaml

on: pull_request
Matrix: pytest-cram
build-docs  /  build-conda
0s
build-docs / build-conda
build-docs  /  build-pip
51s
build-docs / build-pip
Matrix: pathogen-repo-ci
codecov
0s
codecov
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23 errors and 11 warnings
pathogen-repo-ci (seasonal-flu)
Process completed with exit code 1.
build-docs / build-pip
Process completed with exit code 2.
test (python=3.8 biopython=1.80)
Process completed with exit code 1.
test (python=3.9 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=1.80)
Process completed with exit code 1.
test (python=3.10 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=latest)
The operation was canceled.
test (python=3.8 biopython=1.79)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=1.79)
The operation was canceled.
test (python=3.10 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=1.80)
The operation was canceled.
test (python=3.9 biopython=1.79)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=1.79)
The operation was canceled.
test (python=3.8 biopython=1.76)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=1.76)
The operation was canceled.
test (python=3.11 biopython=latest)
The operation was canceled.
test (python=3.9 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=latest)
The operation was canceled.
test (python=3.11 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=1.80)
The operation was canceled.
test (python=3.8 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=latest)
The operation was canceled.
test (python=3.8 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.10 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=1.79)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.10 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=1.79)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=1.76)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.11 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.9 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.11 biopython=1.80)
Mamba support is still experimental and can result in differently solved environments!
test (python=3.8 biopython=latest)
Mamba support is still experimental and can result in differently solved environments!

Artifacts

Produced during runtime
Name Size
output-avian-flu Expired
602 KB
output-ebola Expired
2.81 MB
output-lassa Expired
1020 KB
output-mumps Expired
5.02 MB
output-ncov Expired
6.72 MB
output-rsv Expired
7.49 MB
output-seasonal-flu Expired
85.4 KB
output-tb Expired
14 MB
output-zika Expired
1.49 MB