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[augur ancestral] arg parsing improvements #1837

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[augur ancestral] arg parsing improvements

[augur ancestral] arg parsing improvements #1837

Run time

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Job Run time
pathogen-repo-ci (avian-flu)
1m 5s
test (python=3.8 biopython=1.76)
6m 45s
pathogen-repo-ci (ebola)
57s
test (python=3.8 biopython=1.79)
6m 49s
pathogen-repo-ci (lassa)
45s
pathogen-repo-ci (mumps)
1m 20s
pathogen-repo-ci (ncov)
1m 4s
test (python=3.8 biopython=1.80)
8m 57s
pathogen-repo-ci (rsv)
2m 57s
test (python=3.8 biopython=latest)
6m 24s
pathogen-repo-ci (seasonal-flu)
1m 0s
pathogen-repo-ci (tb)
1m 16s
test (python=3.9 biopython=1.79)
6m 39s
pathogen-repo-ci (zika)
55s
test (python=3.9 biopython=1.80)
6m 44s
test (python=3.9 biopython=latest)
6m 38s
test (python=3.10 biopython=1.80)
6m 39s
test (python=3.10 biopython=latest)
6m 51s
test (python=3.11 biopython=1.80)
6m 50s
test (python=3.11 biopython=latest)
6m 54s
build-docs / build-conda
0s
build-docs / build-pip
52s
codecov
11s
1h 28m 32s