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Merge pull request #1701 from nextstrain/rtd-config #3109

Merge pull request #1701 from nextstrain/rtd-config

Merge pull request #1701 from nextstrain/rtd-config #3109

Triggered via push December 18, 2024 21:11
Status Success
Total duration 21m 0s
Artifacts 14

ci.yaml

on: push
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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33 warnings
pyright
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-docs
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
pathogen-repo-ci-v0 (avian-flu)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (ebola)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (seasonal-flu)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (mumps)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (ncov)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (zika)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (mpox)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (measles)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (tb)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (seasonal-cov)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-docs / build
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (dengue)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci (lassa)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
pathogen-repo-ci-v0 (rsv)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.11 biopython=latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.11 biopython=1.82)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.10 biopython=latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.10 biopython=1.82)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.10 biopython=1.80)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.9 biopython=1.80)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.9 biopython=1.82)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.9 biopython=latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.11 biopython=1.80)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.12 biopython=latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test (python=3.12 biopython=1.82)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
codecov
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size
coverage
165 KB
output-avian-flu
96.5 KB
output-dengue
1.32 MB
output-ebola
111 KB
output-lassa
1.42 MB
output-measles
3.87 MB
output-mpox
12.8 MB
output-mumps
339 KB
output-ncov
708 KB
output-rsv
9.47 MB
output-seasonal-cov
1.57 MB
output-seasonal-flu
53.9 KB
output-tb
5.03 MB
output-zika
745 KB