fix: explicitly specify how the root and ambiguous states are handled… #3096
rneherci.yaml
on: pull_request
Matrix: pytest-cram
mypy
46s
pyright
23s
build-docs
/
build
2m 18s
check-docs
41s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
0s
rebuild-docker-image
0s
Annotations
21 errors and 21 warnings
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test (python=3.10 biopython=latest)
Process completed with exit code 1.
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test (python=3.11 biopython=1.80)
The job was canceled because "_3_10" failed.
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test (python=3.11 biopython=1.80)
The operation was canceled.
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test (python=3.12 biopython=latest)
The job was canceled because "_3_10" failed.
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test (python=3.12 biopython=latest)
The operation was canceled.
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test (python=3.10 biopython=1.82)
The job was canceled because "_3_10" failed.
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test (python=3.10 biopython=1.82)
The operation was canceled.
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test (python=3.12 biopython=1.82)
The job was canceled because "_3_10" failed.
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test (python=3.12 biopython=1.82)
The operation was canceled.
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test (python=3.9 biopython=1.80)
The job was canceled because "_3_10" failed.
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test (python=3.9 biopython=1.80)
The operation was canceled.
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test (python=3.9 biopython=latest)
The job was canceled because "_3_10" failed.
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test (python=3.9 biopython=latest)
The operation was canceled.
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test (python=3.11 biopython=1.82)
The job was canceled because "_3_10" failed.
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test (python=3.11 biopython=1.82)
The operation was canceled.
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test (python=3.9 biopython=1.82)
The job was canceled because "_3_10" failed.
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test (python=3.9 biopython=1.82)
The operation was canceled.
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test (python=3.11 biopython=latest)
The job was canceled because "_3_10" failed.
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test (python=3.11 biopython=latest)
The operation was canceled.
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test (python=3.10 biopython=1.80)
The job was canceled because "_3_10" failed.
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test (python=3.10 biopython=1.80)
The operation was canceled.
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pyright
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-docs
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (ebola)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (avian-flu)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (mumps)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (zika)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (seasonal-flu)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (tb)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (ncov)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (mpox)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (measles)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (seasonal-cov)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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build-docs / build
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (dengue)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci (lassa)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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pathogen-repo-ci-v0 (rsv)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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test (python=3.10 biopython=latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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output-avian-flu
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96.7 KB |
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output-dengue
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1.33 MB |
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output-ebola
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111 KB |
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output-lassa
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1.42 MB |
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output-measles
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3.87 MB |
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output-mpox
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12.8 MB |
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output-mumps
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339 KB |
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output-ncov
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711 KB |
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output-rsv
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9.48 MB |
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output-seasonal-cov
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1.55 MB |
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output-seasonal-flu
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53.4 KB |
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output-tb
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5.02 MB |
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output-zika
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737 KB |
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