Support pandas v2 #3019

Job	Run time
pathogen-repo-ci (dengue)	2m 45s
pathogen-repo-ci (lassa)	48s
check-docs	34s
pathogen-repo-ci (measles)	1m 20s
mypy	45s
pathogen-repo-ci (mpox)	1m 34s
pathogen-repo-ci-v0 (avian-flu)	51s
pathogen-repo-ci (seasonal-cov)	1m 45s
pyright	24s
pathogen-repo-ci-v0 (ebola)	50s
pathogen-repo-ci (zika)	1m 5s
test (python=3.8 biopython=1.80)	12m 15s
pathogen-repo-ci-v0 (mumps)	55s
test (python=3.8 biopython=latest)	11m 34s
pathogen-repo-ci-v0 (ncov)	1m 0s
test (python=3.9 biopython=1.80)	12m 52s
pathogen-repo-ci-v0 (rsv)	8m 57s
test (python=3.9 biopython=latest)	13m 8s
pathogen-repo-ci-v0 (seasonal-flu)	1m 7s
test (python=3.10 biopython=1.80)	12m 18s
pathogen-repo-ci-v0 (tb)	1m 14s
test (python=3.10 biopython=latest)	12m 44s
test (python=3.11 biopython=1.80)	12m 0s
test (python=3.11 biopython=latest)	12m 15s
build-docs / build	2m 23s
codecov	14s
release	0s
rebuild-docker-image	0s
	2h 7m 37s

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