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Add GitHub actions

Add GitHub actions #9

Workflow file for this run

name: CI
on:
workflow_dispatch:
pull_request:
push:
branches:
- master
jobs:
tests:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v3
- name: Set up Miniconda
uses: conda-incubator/setup-miniconda@v2
with:
channels: conda-forge,defaults
mamba-version: "*"
activate-environment: liquid-ref
- name: Restore cached conda environment
id: cache-load
uses: actions/cache/restore@v3
with:
path: /usr/share/miniconda/envs/liquid-ref
key: ${{ runner.os }}-conda-${{ hashFiles('**/environment.yml') }}
- name: Load Environment
if: steps.cache-load.outputs.cache-hit != 'true'
run: |
mamba env update --file environment.yml --prune
- name: Test with pytest
run: |
python -m pytest --cov=reduction --cov=scripts --cov-report=xml --cov-report=term
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
conda-build:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: ["3.8"]
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v3
- name: Set up Miniconda
uses: conda-incubator/setup-miniconda@v2
with:
channels: conda-forge,mantid/label/nightly,defaults
mamba-version: "*"
activate-environment: liquid-ref
- name: Restore cached conda environment
id: cache-load
uses: actions/cache/restore@v3
with:
path: /usr/share/miniconda/envs/liquid-ref
key: ${{ runner.os }}-conda-${{ hashFiles('**/environment.yml') }}
- name: Load Environment
if: steps.cache-load.outputs.cache-hit != 'true'
run: |
mamba env update --file environment.yml --prune
- name: Build python wheel
shell: bash -l {0}
run: |
python -m build --wheel --no-isolation
- name: Build conda libraray
shell: bash -l {0}
run: |
# set up environment
cd conda.recipe
echo "versioningit $(versioningit ../)"
# build the package
VERSION=$(versioningit ../) conda mambabuild --output-folder . .
conda verify noarch/lr_reduction*.tar.bz2
- name: Deploy to Anaconda
shell: bash -l {0}
if: startsWith(github.ref, 'refs/tags/v')
env:
ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
IS_RC: ${{ contains(github.ref, 'rc') }}
run: |
# label is main or rc depending on the tag-name
CONDA_LABEL="main"
if [ "${IS_RC}" = "true" ]; then CONDA_LABEL="rc"; fi
echo pushing ${{ github.ref }} with label $CONDA_LABEL
anaconda upload --label $CONDA_LABEL conda.recipe/noarch/lr_reduction*.tar.bz2