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Updating Dockerfile
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Roberto Vera Alvarez committed Dec 4, 2024
1 parent bfce996 commit 18c3a99
Showing 1 changed file with 9 additions and 7 deletions.
16 changes: 9 additions & 7 deletions Dockerfile
Original file line number Diff line number Diff line change
@@ -1,11 +1,11 @@
# Base Image
FROM continuumio/anaconda3
FROM continuumio/miniconda3

# Metadata
LABEL base.image="continuumio/anaconda3"
LABEL base.image="continuumio/miniconda3"
LABEL version="1"
LABEL software="BAMscale"
LABEL software.version="0.0.1"
LABEL software.version="0.0.7"
LABEL description="BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods."
LABEL tags="BAM"
LABEL website="https://github.com/ncbi/BAMscale"
Expand All @@ -22,10 +22,12 @@ RUN apt-get update && \
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

# Updating Anaconda packages
RUN /opt/conda/bin/conda update conda
RUN /opt/conda/bin/conda update anaconda
RUN /opt/conda/bin/conda update --all
RUN /opt/conda/bin/conda install -c bioconda htslib libbigwig
RUN conda update conda
RUN conda update --all
RUN conda config --add channels defaults
RUN conda config --add channels bioconda
RUN conda config --add channels conda-forge
RUN conda install htslib libbigwig

# Add user ubuntu with no password, add to sudo group
RUN adduser --disabled-password --gecos '' ubuntu
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