WIP: Fitting for wideband datasets in the presence of correlated noise #4732
Workflow file for this run
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| name: CI Tests | |
| on: | |
| push: | |
| # branches: | |
| # - master | |
| pull_request: | |
| schedule: | |
| # run every Monday at 6am UTC | |
| - cron: '0 6 * * 1' | |
| env: | |
| SETUP_XVFB: True # avoid issues if mpl tries to open a GUI window | |
| TOXARGS: '-v' | |
| HYPOTHESIS_PROFILE: 'ci' | |
| jobs: | |
| ci-tests: | |
| name: ${{ matrix.os }}, ${{ matrix.tox_env }} | |
| runs-on: ${{ matrix.os }} | |
| if: "!(contains(github.event.head_commit.message, '[skip ci]') || contains(github.event.head_commit.message, '[ci skip]'))" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| python: '3.13' | |
| tox_env: 'ephemeris_connection' | |
| - os: ubuntu-latest | |
| python: '3.13' | |
| tox_env: 'black' | |
| - os: ubuntu-latest | |
| python: '3.13' | |
| tox_env: 'py313-test-cov' | |
| - os: ubuntu-latest | |
| python: '3.13' | |
| tox_env: 'notebooks' | |
| # - os: ubuntu-latest | |
| # python: '3.8' | |
| # tox_env: 'docs' | |
| # - os: ubuntu-latest | |
| # python: '3.10' | |
| # tox_env: 'py310-test-alldeps-cov' | |
| # - os: macos-12 | |
| # python: '3.13' | |
| # tox_env: 'py313-test' | |
| # - os: windows-latest | |
| # python: '3.8' | |
| # tox_env: 'py38-test' | |
| - os: ubuntu-latest | |
| python: '3.9' | |
| tox_env: 'oldestdeps' | |
| # - os: ubuntu-latest | |
| # python: '3.8' | |
| # tox_env: 'codestyle' | |
| # uncomment this if needed to run a single test quickly | |
| # can specify OS and python versions | |
| # - os: macos-12 | |
| # python: '3.12' | |
| # tox_env: 'singletest' | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install base dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox | |
| - name: Install graphviz dependency | |
| if: "endsWith(matrix.tox_env, 'build_docs')" | |
| run: sudo apt-get -y install graphviz | |
| - name: Install pandoc dependency | |
| if: "endsWith(matrix.tox_env, 'docs')" | |
| run: sudo apt-get -y install pandoc | |
| - name: Print Python, pip, and tox versions | |
| run: | | |
| python -c "import sys; print(f'Python {sys.version}')" | |
| python -c "import pip; print(f'pip {pip.__version__}')" | |
| python -c "import tox; print(f'tox {tox.__version__}')" | |
| - name: Run tests | |
| run: tox -e ${{ matrix.tox_env }} | |
| - name: Upload coverage to codecov | |
| if: "endsWith(matrix.tox_env, '-cov')" | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| files: coverage.xml | |
| # - name: Publish docs as an artifact | |
| # if: "endsWith(matrix.tox_env, 'docs')" | |
| # uses: actions/upload-artifact@v2 | |
| # with: | |
| # name: documentation | |
| # path: .tox/docs_out/ | |
| macos-latest-py313: | |
| runs-on: macos-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set-Up Python Env | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| init-shell: bash | |
| environment-name: pint | |
| cache-environment: true | |
| cache-downloads: true | |
| create-args: >- | |
| --platform osx-64 | |
| -c conda-forge | |
| python=3.13 | |
| astropy | |
| git | |
| - name: Install base dependencies | |
| shell: bash -el {0} | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install tox pytest hypothesis numdifftools pathos setuptools | |
| - name: Print OS, machine info | |
| shell: bash -el {0} | |
| run: | | |
| python -c "import os; print(f'os {os.uname()}')" | |
| python -c "import platform; print(f'processor {platform.processor()}')" | |
| python -c "import numpy as np; print(f'eps: {np.finfo(np.longdouble).eps}')" | |
| - name: Print Python, pip, and tox versions | |
| shell: bash -el {0} | |
| run: | | |
| python -c "import sys; print(f'Python {sys.version}')" | |
| python -c "import pip; print(f'pip {pip.__version__}')" | |
| python -c "import tox; print(f'tox {tox.__version__}')" | |
| - name: Install PINT and requirements | |
| shell: bash -el {0} | |
| run: | | |
| python -m pip install -r requirements.txt | |
| python -m pip install -r requirements_dev.txt | |
| python -m pip install --force-reinstall --no-deps . | |
| - name: Run tests | |
| shell: bash -el {0} | |
| run: pytest -v --pyargs tests --reruns 5 | |