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Merge pull request #243 from rwilson-ebi/master
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Modified the imaging-data-csv-check command in the Makefile to remove…
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rwilson-ebi authored Nov 4, 2023
2 parents 05931a5 + 45eb035 commit 27d6e38
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -163,7 +163,7 @@ imaging-omero-upload:


imaging-data-csv-check:
@scp $(etl-host):$(etl-dir)/$(dr-tag)/output/images_pipeline_input_csv/part-*.csv $(input-data-path)/imaging-data-archive/$(dr-tag)/impc_images_input_wo_omero_ids.csv
@cp $(etl-dir)/$(dr-tag)/output/images_pipeline_input_csv/part-*.csv $(input-data-path)/imaging-data-archive/$(dr-tag)/impc_images_input_wo_omero_ids.csv
@if [ -f "$(input-data-path)/imaging-data-archive/$(dr-tag)/impc_images_input_wo_omero_ids.csv" ]; then echo "CSV file successfully retrieved"; else "ERROR: The Pre-statistical analysis task did not produce a CSV file!"; fi


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