Syntax changes for github default env vars

mesoscope · Apr 4, 2023 · 4257f8a · 4257f8a
1 parent 887679f
commit 4257f8a
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/.github/workflows/analyze.yml b/.github/workflows/analyze.yml
@@ -24,7 +24,7 @@ jobs:
         pack -r cellpack/tests/recipes/v2/test_spheres.json -c cellpack/tests/packing-configs/test_config.json
     - name: Modify JSON with PR sub_directory path
       run: |
-        jq --arg branch_name "$GITHUB_REF_NAME" '.create_report.results_output_path |= "https://cellpack-results.s3.us-west-2.amazonaws.com/\($branch_name)/spheresSST"' cellpack/tests/analysis-configs/PR_analysis_config.json > cellpack/tests/analysis-configs/PR_analysis_config_temp.json
+        jq --arg branch_name "${{  github.ref.name  }}" '.create_report.results_output_path |= "https://cellpack-results.s3.us-west-2.amazonaws.com/\($branch_name)/spheresSST"' cellpack/tests/analysis-configs/PR_analysis_config.json > cellpack/tests/analysis-configs/PR_analysis_config_temp.json
         mv cellpack/tests/analysis-configs/PR_analysis_config_temp.json cellpack/tests/analysis-configs/PR_analysis_config.json
     - name: Run analysis code
       run: analyze -a cellpack/tests/analysis-configs/PR_analysis_config.json 

diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -86,4 +86,4 @@ jobs:
       uses: pypa/gh-action-pypi-publish@master
       with:
         user: meganrm
-        password: ${{ secrets.PYPI_TOKEN }}
+        password: ${{ secrets.PYPI_TOKEN }}
diff --git a/.github/workflows/cleanup.yml b/.github/workflows/cleanup.yml
@@ -15,8 +15,8 @@ jobs:
         sudo apt-get install -y awscli
     - name: Remove files in results sub_dir
       run: |
-        if aws s3 ls s3://cellpack-results/$GITHUB_REF/ ; then
-          aws s3 rm s3://cellpack-results/$GITHUB_REF --recursive
+        if aws s3 ls s3://cellpack-results/${{  github.ref  }}/ ; then
+          aws s3 rm s3://cellpack-results/${{  github.ref }} --recursive
         else:
           echo "The specified path does not exist"
         fi