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JSONSchema compliance for namespaces #213
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MCMcCallum
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Jan 2, 2021
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- Addresses issue Next generation jams #208 phase 1
- Updated JAMs schema to be json schenma compliant
- Previously dense observation types are now entered as a single observation in the Annotation observation list, they no longer redefine the observation list itself, rather, just the elements within it. This means that all Annotations now have a list of observations, the elements of which can be dense observations themselves
- the import_labs function has been moved from the util module to the core module. In a future PR it should be modified to be a constructor for JObjects
- Fixed serialization JAMs for bools, lists and dicts
- Updated jsonschema to latest version - necessary for determining namespaces based on a const namespace property
- Local namespaces are no longer supported - a necessity to become jsonschema compliant
- Version bumped
- Tests updated to adhere to new schema for objects with DenseObservations
- Removed spurious validation and schema methods / attributes in jams.core module
- add_namespace and is_dense is removed from the jams.schema module. All namespaces are now available in the jams.schema.NAMESPACES dictionary
- schema for each observation type is now available in the jams.schema.OBSERVATIONS_SCHEMA dictionary
- Previously dense observation types are now entered as a single observation in the Annotation observation list, they no longer redefine the observation list itself, rather, just the elements within it. This means that all Annotations now have a list of observations, the elements of which can be dense observations themselves - the import_labs function has been moved from the util module to the core module. In a future PR it should be modified to be a constructor for JObjects - Fixed serialization JAMs for bools, lists and dicts - Updated jsonschema to latest version - necessary for determining namespaces based on a const namespace property - Local namespaces are no longer supported - a necessity to become jsonschema compliant - Version bumped - Tests updated to adhere to new schema for objects with DenseObservations - Removed spurious validation and __schema__ methods / attributes in jams.core module - add_namespace and is_dense is removed from the jams.schema module. All namespaces are now available in the jams.schema.NAMESPACES dictionary - schema for each observation type is now available in the jams.schema.OBSERVATIONS_SCHEMA dictionary
Hey! Is this in response to an issue? Was there a side convo I’m missing? |
@MCMcCallum and I had actually hashed this out quite a bit before the implementation, but it was out-of-band. Sorry that I haven't had time to dig into this PR thoroughly btw. Teaching in a pandemic, you know 😬
The plan in #208 , phase 1, is to retain backward compatibility to the previous schema. However, dynamic namespace support will eventually dropped, and scaper will likely need to adapt in response. |