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  1. Kraken2-output-manipulation Kraken2-output-manipulation Public

    Forked from npbhavya/Kraken2-output-manipulation

    Kraken output generates a report for each datasets, this script takes these individual output and combines it to one file, where each column is number of reads that were rooted to this taxon (colum…

    Python

  2. KrakenTools KrakenTools Public

    Forked from jenniferlu717/KrakenTools

    KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

    Python

  3. snippy snippy Public

    Forked from tseemann/snippy

    ✂️ ⚡ Rapid haploid variant calling and core genome alignment

    Perl