Improvements and extensions

Introduced improvements and extensions:

• an improvement of the parsing of 3D structures of multiple biological molecules stored in a single file,
• an improvement of the routine used for pairing of atoms during the computation of the RMSD score,
• an improvement of the process of alignment construction with a better handling of overlapping duplexes,
• an improvement of the process of identification of feasible partial alignments by heuristic HUNGARIAN_METHOD_DRIVEN_LONGEST_ALIGNMENT_PARTIAL_SOLUTIONS_CONSIDERED,
• the introduction of the possibility of selection of acceptance criteria that will be used for identification of a potentially better alignment,
• the extension of a textual description of the descriptor,
• the introduction of a sequence alignment that is generated as a result of structural comparison of a descriptor pair,
• the introduction of the support for generation of EBI-inspired, compatible PDB file bundles (tar.gz) in the case of conversion of 3D structures of large biomolecules that are stored in format CIF only.

Initial release

v1.0

tagging release 1.0