[WIP/Tests] Use umamba for mamba tests #128
Workflow file for this run
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| name: Unix tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - 'docs/**' | |
| - '**.md' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| libmamba_tests_unix: | |
| name: libmamba tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| build_type: [Release, Debug] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Create build environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ./libmamba/environment-dev.yml | |
| environment-name: build_env | |
| cache-environment: true | |
| - uses: hendrikmuhs/ccache-action@main | |
| with: | |
| variant: sccache | |
| key: ${{ github.job }}-${{ matrix.os }} | |
| restore-keys: | | |
| libmamba-${{ matrix.os }} | |
| - name: Build libmamba | |
| shell: bash -l {0} | |
| run: | | |
| cmake -B build/ \ | |
| -D CMAKE_BUILD_TYPE=${{ matrix.build_type }} \ | |
| -D BUILD_LIBMAMBA=ON \ | |
| -D BUILD_SHARED=ON \ | |
| -D BUILD_LIBMAMBA_TESTS=ON \ | |
| -D CMAKE_CXX_COMPILER_LAUNCHER=sccache \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=sccache \ | |
| -G Ninja | |
| cmake --build build/ --parallel --target test_libmamba testing_libmamba_lock | |
| - name: Run libmamba tests | |
| shell: bash -l {0} | |
| run: | | |
| unset CONDARC # Interferes with tests | |
| cd build && ninja test | |
| - name: Show build cache statistics | |
| run: sccache --show-stats | |
| mamba_tests_unix: | |
| name: Mamba tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| build_type: [Release, Debug] | |
| python_version: ["3.8"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: create build environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ./mamba/environment-dev.yml # TODO adjust with missing stuff of umamba and remove unecessary stuff | |
| environment-name: build_env | |
| cache-environment: true | |
| create-args: >- | |
| conda-build | |
| python=${{ matrix.python_version }} | |
| - uses: hendrikmuhs/ccache-action@main | |
| with: | |
| variant: sccache | |
| key: ${{ github.job }}-${{ matrix.os }} | |
| restore-keys: | | |
| libmamba-${{ matrix.os }} | |
| - name: Run conda init # TODO to be replaced | |
| shell: bash -l {0} | |
| run: conda init | |
| - name: build libmamba Python bindings | |
| shell: bash -l {0} | |
| run: | | |
| cmake -B build/ \ | |
| -D CMAKE_BUILD_TYPE=${{ matrix.build_type }} \ | |
| -D CMAKE_INSTALL_PREFIX="${CONDA_PREFIX}" \ | |
| -D BUILD_LIBMAMBAPY=ON \ | |
| -D BUILD_LIBMAMBA=ON \ | |
| -D BUILD_MICROMAMBA=ON \ | |
| -D BUILD_SHARED=ON \ | |
| -D BUILD_MAMBA_PACKAGE=ON \ | |
| -D CMAKE_CXX_COMPILER_LAUNCHER=sccache \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=sccache \ | |
| -G Ninja | |
| cmake --build build/ --parallel | |
| cmake --install build/ | |
| - name: Install libmambapy | |
| shell: bash -l {0} | |
| run: | | |
| python -m pip install --no-deps --no-build-isolation --editable ./libmambapy/ | |
| #- name: Check libmambapy stubs | |
| #shell: bash -l {0} | |
| #run: | | |
| #pybind11-stubgen libmambapy.bindings | |
| #pre-commit run --files stubs/libmambapy/binginds-stubs/__init__.pyi | |
| #python compare_stubs.py libmambapy/libmambapy/__init__.pyi stubs/libmambapy/bindings-stubs/__init__.pyi | |
| - name: Show build cache statistics | |
| run: sccache --show-stats | |
| - name: install mamba | |
| shell: bash -l {0} | |
| run: | | |
| python -m pip install --no-deps --no-build-isolation ./mamba[test] | |
| - name: Run mamba tests suite | |
| shell: bash -l {0} | |
| run: | | |
| export TEST_MAMBA_EXE=$(pwd)/build/micromamba/micromamba | |
| unset CONDARC # Interferes with tests | |
| pytest -v --capture=tee-sys mamba/tests | |
| - name: Run mamba create/update tests | |
| shell: bash -l {0} | |
| run: | | |
| unset CONDARC # Interferes with tests | |
| mamba create -n test_env xtensor -c conda-forge -y | |
| mamba env create -f mamba/tests/test_env.yml | |
| mamba env update -f mamba/tests/update_env.yml | |
| - name: Run mamba local channel test | |
| shell: bash -l {0} | |
| run: | | |
| unset CONDARC # Interferes with tests | |
| if [ "$RUNNER_OS" == "Linux" ]; then | |
| mkdir -p $CONDA_PREFIX/conda-bld/linux-64 | |
| wget -P $CONDA_PREFIX/conda-bld/linux-64 https://anaconda.org/conda-forge/xtensor/0.21.8/download/linux-64/xtensor-0.21.8-hc9558a2_0.tar.bz2 | |
| wget -P $CONDA_PREFIX/conda-bld/linux-64 https://anaconda.org/conda-forge/xtl/0.6.21/download/linux-64/xtl-0.6.21-h0efe328_0.tar.bz2 | |
| else | |
| mkdir -p $CONDA_PREFIX/conda-bld/osx-64 | |
| wget -P $CONDA_PREFIX/conda-bld/osx-64 https://anaconda.org/conda-forge/xtensor/0.21.8/download/osx-64/xtensor-0.21.8-h879752b_0.tar.bz2 | |
| wget -P $CONDA_PREFIX/conda-bld/osx-64 https://anaconda.org/conda-forge/xtl/0.6.21/download/osx-64/xtl-0.6.21-h6516342_0.tar.bz2 | |
| fi | |
| mamba create -n l_o_cal_test xtensor -c local -c conda-forge -y | |
| mamba list -n l_o_cal_test | |
| mamba list -n l_o_cal_test | tail -n +3 > list.txt | |
| if [ "$(grep -c "local" list.txt)" -ne 2 ]; then | |
| echo "DEBUG INFO: failure" | |
| cat list.txt | |
| exit 1 | |
| fi | |
| - name: Run server auth tests | |
| shell: bash -l {0} -euo pipefail -x | |
| run: | | |
| export TEST_MAMBA_EXE="${PWD}/build/micromamba/micromamba" | |
| cd mamba/tests | |
| if [[ "$(uname -s)" == "Linux" ]]; then | |
| ./generate_gpg_keys.sh | |
| fi | |
| ./testserver.sh | |
| - name: Shell init | |
| shell: bash -l {0} -euo pipefail -x | |
| run: | | |
| mamba init | |
| umamba_integration_tests_unix: | |
| name: Micromamba integration tests | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| build_type: [Release, Debug] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: create build environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ./micromamba/environment-dev.yml | |
| environment-name: build_env | |
| cache-environment: true | |
| - uses: hendrikmuhs/ccache-action@main | |
| with: | |
| variant: sccache | |
| key: ${{ github.job }}-${{ matrix.os }} | |
| restore-keys: | | |
| libmamba-${{ matrix.os }} | |
| - name: build micromamba | |
| shell: bash -l {0} | |
| run: | | |
| cmake -B build/ \ | |
| -D CMAKE_BUILD_TYPE=${{ matrix.build_type }} \ | |
| -D BUILD_MICROMAMBA=ON \ | |
| -D BUILD_MICROMAMBA_SERVER=ON \ | |
| -D BUILD_LIBMAMBA=ON \ | |
| -D BUILD_SHARED=ON \ | |
| -D CMAKE_CXX_COMPILER_LAUNCHER=sccache \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=sccache \ | |
| -G Ninja | |
| cmake --build build/ --parallel | |
| - name: build cache statistics | |
| run: sccache --show-stats | |
| - name: install zsh, xonsh, fish and tcsh in linux | |
| if: matrix.os == 'ubuntu-latest' | |
| shell: bash -l -eo pipefail {0} | |
| run: | | |
| sudo apt-get install zsh xonsh fish tcsh -y | |
| - name: install xonsh and fish in mac | |
| if: matrix.os == 'macos-latest' | |
| shell: bash -l -eo pipefail {0} | |
| run: | | |
| brew install fish xonsh | |
| - name: micromamba python based tests | |
| shell: bash -l -eo pipefail {0} | |
| run: | | |
| export TEST_MAMBA_EXE=$(pwd)/build/micromamba/micromamba | |
| unset CONDARC # Interferes with tests | |
| pytest -v --capture=tee-sys micromamba/tests/ |