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#4 Bioconda instead of obscure manually maintained one
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lemieuxl committed Jun 18, 2024
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18 changes: 4 additions & 14 deletions README.md
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Expand Up @@ -26,18 +26,11 @@ Using `pip`:
pip install pyplink
```

Using `conda`:
Using `conda` (make sure [Bioconda](https://bioconda.github.io/) is configured;
thanks to @nebfield for the recipe):

```bash
conda install pyplink -c http://statgen.org/wp-content/uploads/Softwares/pyplink
```

It is possible to add the channel to conda's configuration, so that the
`-c http://statgen.org/...` can be omitted to update or install the package.
To add the channel, perform the following command:

```bash
conda config --add channels http://statgen.org/wp-content/uploads/Softwares/pyplink
conda install pyplink
```

### Updating
Expand All @@ -51,11 +44,8 @@ pip install -U pyplink
To update the module using `conda`:

```bash
# If the channel has been configured (see above)
# Make sure bioconda is configured
conda update pyplink

# Otherwise
conda update pyplink -c http://statgen.org/wp-content/uploads/Softwares/pyplink
```

## Testing
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