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Pargen refactor #564

Merged
merged 178 commits into from
Apr 26, 2024
Merged

Pargen refactor #564

merged 178 commits into from
Apr 26, 2024

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ggmarshall
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@ggmarshall ggmarshall commented Mar 8, 2024 •
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  • Energy cal plotting to dataflow
  • fix results output
  • Energy optimisation to new math
  • A/E to new math + add run by run sfs
  • LQ to new math
  • extract tau to class
  • Unit tests
  • Notebooks

ggmarshall and others added 30 commits February 9, 2024 15:36
@ggmarshall
add full widtha t frac max functions
e424679
@ggmarshall
more use of percentiles over fixed bins, check if fit values are reas…
0d23a0c 
…onable
@ggmarshall
new fitting function and updates to bounds, guess
c2cec0c
@ggmarshall
update to new fit function, better handling of units and switches to …
f630e6f 
…fw at frac max
@ggmarshall
no need to calculate no tail fits if not allowed to drop tail
18444b7
@ggmarshall
changes to new fitting
ff3a313
@ggmarshall
add extra functions for guess
82daeab
@ggmarshall
check for peaks in range not exact values
a9f8a39
@ggmarshall
add docstrings
798e8d9
@ggmarshall
Merge branch 'main' of https://github.com/ggmarshall/pygama
a292c5a
@ggmarshall
moved write out of func and changed to pval
50eeb8c
@ggmarshall
bugfixes for new fitting
26a72c6
@ggmarshall
bugfixes for new fitting, default alpha to 0 if fail, return tuple fo…
937c27c 
…r chisqure when fail
@ggmarshall
added get mode
0ba1636
@ggmarshall
bugfixes for new fitting and cleanup of survial fraction determination
791f9c1
@ggmarshall
change to use mode instead of mu
f1e217d
@ggmarshall
add ability to use different peak vars for calibration, move logs int…
835c548 
…o functions, cleanup
@ggmarshall
updated to use new dict format and added plots
b2290e9
@ggmarshall
merged high stats fit with normal, moved peak and range definitions t…
06d18e2 
…o init, cleaned up energy res calculation
@ggmarshall
changed find peaks and get peaks to take in energy and rough pars, re…
37a7708 
…moved deprecated functions
@ggmarshall
Merge branch 'legend-exp:main' into main
3d512dd
@ggmarshall
unleash pre-commit on pargen
d2dce32
@ggmarshall
pre-commit fixes
5ba527a
@ggmarshall
pc fixes
278b1b8
@ggmarshall
start of refactor
a22b096
@ggmarshall
remove deprecated files
feed11e
@ggmarshall
update energy res fitting and top level funcs
4cecb92
@ggmarshall
added fixing of pars
f02d3e1
@ggmarshall
added ability for funcs to not update pars
60a20e3
@ggmarshall
merge refactor
9694792
ggmarshall and others added 29 commits April 7, 2024 00:44
@ggmarshall
switch to hesse
fbbe4a5
@ggmarshall
more samples for bootstrap
31a2946
@ggmarshall
use simple scaling for deg 0
38fe19e
@gipert
[evt] switch to ___ as subtable separator in config
3dc2258
@gipert
build_evt(): bug fix
1b27b26
@gipert
[evt.modules] just a minor rename
59ceda0
@gipert
[evt.modules.spms] add temporary processor to get hit.is_valid_hit
7e23530
@gipert
Support YAML config files
b846f19
@gipert
[ci] Python 3.12
08e2ebe
@gipert
Bump pydataobj/daq2lh5 version
c11d775
@gipert
Revert "[ci] Python 3.12"
1922e9c 
This reverts commit 08e2ebe.
@gipert
[evt] support getting tcm.array_idx
68fb91e
@gipert
Merge pull request legend-exp#571 from legend-exp/pre-commit-ci-updat…
408fd78 
…e-config

chore: update pre-commit hooks
@gipert
Merge branch 'main' into build-evt-refactor
becbfc3
@pre-commit-ci
style: pre-commit fixes
567868e
@gipert
[evt.modules] add xtalk corrector placeholder
facde97
@gipert
Merge pull request legend-exp#567 from legend-exp/build-evt-refactor
8563b51 
`build_evt()` partial refactor (including `modules.spms`)
@ggmarshall
plotting fix
5eded73
@ggmarshall
add bin width options
23d330b
@ggmarshall
fitting options
dfc8fda
@ggmarshall
merges
2d1b088
@ggmarshall
bugfix for plotting
9283a45
@ggmarshall
add recovery cut code
0143440
@pre-commit-ci
style: pre-commit fixes
cebfa60
@ggmarshall
pc
8f97b4e
@ggmarshall
Merge branch 'main' of https://github.com/ggmarshall/pygama
023ea38
@ggmarshall
fix mode to use tighter bound first
d1e7cb7
@ggmarshall
add more error catching
fd20746
@ggmarshall
bugfix for results of get peaks and valid check before updating guess
2c79cd1
@gipert gipert merged commit e6e178f into legend-exp:refactor Apr 26, 2024
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math Statistics/mathematics pargen Generation of analysis parameters (calibrations etc.)
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3 participants
@ggmarshall @sagitta42 @gipert