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Merge refactoring branch #2

Merged
merged 161 commits into from
Jul 18, 2024
Merged

Merge refactoring branch #2

merged 161 commits into from
Jul 18, 2024

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xiaochendu
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  • Synchronize with MLMat private repo

xiaochendu and others added 30 commits February 5, 2024 21:02
xiaochendu added 29 commits July 5, 2024 21:46
… branch

- make data paths more logical
- merge changes from `pourbaix` branch but delete WIP Pourbaix sampling code
- there might be some bugs because this code was written on my local machine
- refactor usable functions to `mcmc` folders
- unify style; make it more modular
- change docstrings to google format
- first Copilot-generated commit statement
- write citation
- `calculators.py` and `clustering.py`
- correct units for latent space `clustering.py` script
- fix `latent_space_clustering.ipynb`
- add dev dependencies
- remove commented out code and unused files
- stylistic changes
- fix doc typos
- load from file to reduce code length
- add docstring details
@xiaochendu xiaochendu merged commit 4efaf92 into master Jul 18, 2024
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