Identification of cis gene expression regulatory codes in the genome
Identification of sparsely distributed clusters of cis-regulatory elements in sets of co-expressed genes.
Kreiman G
Nucleic Acids Research (2004), 32:2889-2900. PMID: 15155858
Main Text http://klab.tch.harvard.edu/publications/PDFs/gk1682.pdf
Supplementary information http://klab.tch.harvard.edu/code/cisregul/Cisregul.html