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Sailfish v0.7.5

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@rob-p rob-p released this 26 Sep 02:32
· 110 commits to master since this release

This release addresses a few issues and adds some new features:

Fixes include:

  • Build from source now works with Apple Clang 7.0 (thanks for reporting this Rory Kirchner).
  • Ensure that lengths are calculated correctly if empirical fragment length distribution contains only a single value.

New features:

  • Added the ability to generate samples from the posterior distribution of abundances via Gibbs sampling. This feature is enabled with --useGSOpt, and the number of samples to generate is provided via --numGibbsSamples
  • When aggregating estimates to the gene level, one can now provide --txpAggregationKey to decide which key from the gtf file to use for aggregation.