Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) #2091

johanna-reiml-hpi · 2024-02-06T11:03:59Z

Describe your changes

This reworks the build pipeline to allow building CUDA variants for the pytorch-notebook image. Examples images: https://quay.io/repository/ai-hpi/pytorch-notebook

Commit "feat: build cuda variants of pytorch" (43f2d32): minimal example for how to add cuda variants for the pytorch-notebook image.
Commit "feat: build with variant tag" (6198575): rework the pipeline to build these images under the tag of the pytorch-notebook instead (adds a "cuda-" and "cuda11-" prefix). This logic is implemented by adding a new "variant" argument for the GitHub Actions and the tagging scripts. I also refactored docker.yaml to get rid of the redundancy for the aarch64 vs x86_64 build.

In the issue there were discussions about using the official CUDA images instead of ubuntu:22.04 as the root container. This is not desirable in my opinion, as these images are not updated frequently and are based on older ubuntu:22.04 images. Instead a simpler approach works: packages like pytorch and tensorflow bundle their own CUDA binaries via pip these days.

I looked into CUDA builds for TensorFlow and PyTorch (I am not sure if CUDA support is really a priority for other notebooks). In order to support NVIDIA driver versions older than 525, builds for CUDA 11.8 should also be included.

For PyTorch (https://pytorch.org/get-started/locally/) everything works as expected. I also added NVIDIA's pip index for their most recent packages as an install argument --extra-index-url=https://pypi.nvidia.com, but it's likely not needed.
For TensorFlow (https://www.tensorflow.org/install/source?hl=en#gpu) there were multiple issues:
- CUDA 11: The most recent version (2.15.0) updated the CUDA dependencies from 11.8 to 12.2. So the last version which supports CUDA 11.8 is 2.14.0. However, that version is not functional under python 3.11, because a dependency (tensorrt==8.5.3.1) is not available for python 3.11: tensorrt==8.5.3.1 from [and-cuda] not available in Python 3.11 tensorflow/tensorflow#61986
- CUDA 12 (latest): Using pip install --no-cache-dir --extra-index-url=https://pypi.nvidia.com tensorrt tensorflow[and-cuda] didn't seem to work for me and tensorflow was unable to find tensorrt. I assume the workaround in the linked issue would work, but it seems better to either manually build the package, try nightly builds, or wait for 2.16.0.

Issue ticket if applicable

Fix (for pytorch): #1557

Checklist (especially for first-time contributors)

I have performed a self-review of my code
If it is a core feature, I have added thorough tests
- Example build: https://github.com/johanna-reiml-hpi/docker-stacks/actions/runs/7788922093
- Example images: https://quay.io/repository/ai-hpi/pytorch-notebook?tab=tags
- No aarch64 tests yet (I assume you want to use your self-hosted runners)
I will try not to use force-push to make the review process easier for reviewers
I have updated the documentation for significant changes
- Not sure what parts need to be updated. I mentioned the existence of optional CUDA tags under the pytorch-notebook section.

johanna-reiml-hpi · 2024-02-06T23:12:39Z

From what I can see the build for aarch64 seems to fail due to running out of disk space (seems to error when archiving the image, I had similar errors for CUDA builds running out of disk space). Is there an issue with also enabling this part for the self-hosted aarch64 runners? Right now it only runs for x86_64.

      # Image with CUDA needs extra disk space
      - name: Free disk space 🧹
        if: contains(inputs.variant, 'cuda') && inputs.platform == 'x86_64'
        uses: jlumbroso/free-disk-space@54081f138730dfa15788a46383842cd2f914a1be
        with:
          tool-cache: false
          android: true
          dotnet: true
          haskell: true
          large-packages: false
          docker-images: false
          swap-storage: false

tagging/get_prefix.py

docs/using/selecting.md

Makefile

.github/workflows/docker-build-test-upload-all.yml

.github/workflows/docker-build-test-upload.yml

.github/workflows/docker.yml

mathbunnyru · 2024-02-08T09:54:05Z

there an issue with also enabling this part for the self-hosted aarch64 runners?

Self-hosted runners are not usually bloated with lots of software. I created our aarch64 runners using ubuntu provided by Google Cloud and running this on top: https://github.com/jupyter/docker-stacks/blob/main/aarch64-runner/setup.sh

Could you please tell me how much free disk is needed to build one GPU image?
I am not sure people need aarch64 GPU images, so let's not build them in this PR, though.
Also, this will increase the build time (we have limited amount of self-hosted runners)

Makefile

images/pytorch-notebook/Dockerfile

images/pytorch-notebook/cuda/Dockerfile

.github/workflows/docker-build-test-upload.yml

mathbunnyru · 2024-02-08T17:53:18Z

@johanna-reiml-hpi I think the quality of this PR is awesome 👍
Great job.
I left a few comments of some things that may be improved, please, take a look.

We now have a policy for merging new images and adding new packages 🎉

@mathbunnyru, @consideRatio, @yuvipanda, and @manics, please vote 👍 to accept this change and 👎 not to accept it (use a reaction to this message)
The voting deadline is the 8th of March (a month since I posted this message).
The change is accepted, if there are at least 2 positive votes.

We can have a discussion until the deadline, so please express your opinions.

(cherry picked from commit 12b50af)

(cherry picked from commit f423145)

(cherry picked from commit 446b45a)

(cherry picked from commit 32955ce)

(cherry picked from commit 68c6744)

(cherry picked from commit 5f1ac0a)

(cherry picked from commit 3fce366)

(cherry picked from commit 217144e)

johanna-reiml-hpi · 2024-02-11T21:41:24Z

there an issue with also enabling this part for the self-hosted aarch64 runners?

Self-hosted runners are not usually bloated with lots of software. I created our aarch64 runners using ubuntu provided by Google Cloud and running this on top: https://github.com/jupyter/docker-stacks/blob/main/aarch64-runner/setup.sh

Could you please tell me how much free disk is needed to build one GPU image? I am not sure people need aarch64 GPU images, so let's not build them in this PR, though. Also, this will increase the build time (we have limited amount of self-hosted runners)

I am not sure how much space is exactly needed, but the 14 GB provided for ubuntu-latest weren't enough and resulted in failed builds. I assume probably like 20 GB in total would be sufficient.

mathbunnyru

Only small comments. If you have some time, let's change these small details as well.

.github/workflows/docker-build-test-upload.yml

.github/workflows/docker.yml

tagging/apply_tags.py

mathbunnyru · 2024-02-12T09:40:01Z

there an issue with also enabling this part for the self-hosted aarch64 runners?

Self-hosted runners are not usually bloated with lots of software. I created our aarch64 runners using ubuntu provided by Google Cloud and running this on top: https://github.com/jupyter/docker-stacks/blob/main/aarch64-runner/setup.sh
Could you please tell me how much free disk is needed to build one GPU image? I am not sure people need aarch64 GPU images, so let's not build them in this PR, though. Also, this will increase the build time (we have limited amount of self-hosted runners)

I am not sure how much space is exactly needed, but the 14 GB provided for ubuntu-latest weren't enough and resulted in failed builds. I assume probably like 20 GB in total would be sufficient.

I cleaned up the space on our aarch64 runners.
Unfortunately, Docker has an issue, where cleaning up doesn't remove everything it should, so had to clean up manually.

mathbunnyru · 2024-02-12T09:57:10Z

It would be nice to have a GPU version of tensorflow as well.
I saw the comment in the description, so thank you for trying.

I would suggest trying to install conda-forge version of tensorflow package as well when we merge this PR.
If it works, create another PR after this will be merged (should be small and easy), if not, nothing to do.
In both cases, please, write if it worked or not (in this PR).

mathbunnyru · 2024-02-12T11:57:59Z

there an issue with also enabling this part for the self-hosted aarch64 runners?

Self-hosted runners are not usually bloated with lots of software. I created our aarch64 runners using ubuntu provided by Google Cloud and running this on top: https://github.com/jupyter/docker-stacks/blob/main/aarch64-runner/setup.sh
Could you please tell me how much free disk is needed to build one GPU image? I am not sure people need aarch64 GPU images, so let's not build them in this PR, though. Also, this will increase the build time (we have limited amount of self-hosted runners)

I am not sure how much space is exactly needed, but the 14 GB provided for ubuntu-latest weren't enough and resulted in failed builds. I assume probably like 20 GB in total would be sufficient.

I cleaned up the space on our aarch64 runners. Unfortunately, Docker has an issue, where cleaning up doesn't remove everything it should, so had to clean up manually.

Seems to work - the build is green 🎉

mathbunnyru · 2024-02-12T12:07:44Z

One more thought - I don't know a lot about cuda versioning, but it might be worth it to add more precise version of cuda as a tag prefix (so, we need to add a new tagger to cuda flavored images).
People might want to (or be forced to) stay on 12.1 even when 12.2 pytorch-cuda is released.

So, the prefix tag will stay cuda12- (nothing to change here), but the final image can look something like jupyter/pytorch-notebook:cuda12-cuda12.1, so people will be to more precisely say they cuda version.

What do you think?
I don't consider this to be a blocker for this PR, but it would definitely be nice to add this tag later.

johanna-reiml-hpi · 2024-02-12T22:10:06Z

I had another look at the official pytorch Dockerfile, CUDA Dockerfiles and nvidia documentation for some env variables, so here are a few extra points to consider:

The following ENV should be added to the Dockerfile according to the linked NVIDIA documentation:

ENV NVIDIA_VISIBLE_DEVICES all
ENV NVIDIA_DRIVER_CAPABILITIES compute,utility

I don't think the CUDA installation for aarch64 worked actually. The CUDA variant build times are identical to the CPU ones. I checked the official install guide and when selecting MacOS you get: # CUDA is not available on MacOS, please use default package. The official pytorch Dockerfile also only installs the CPU version for aarch64. I will exclude aarch64 from this PR.
The official pytorch Dockerfile installs the CUDA dependencies via conda. This adds CUDA binaries to conventional paths instead of having CUDA as a pip package (ENV LD_LIBRARY_PATH /usr/local/nvidia/lib:/usr/local/nvidia/lib64, ENV PATH /usr/local/nvidia/bin:/usr/local/cuda/bin:$PATH). I am not sure which approach is better. The current version might be nicer in terms of simplicity (and follows the official install guide).

johanna-reiml-hpi · 2024-02-12T22:21:05Z

One more thought - I don't know a lot about cuda versioning, but it might be worth it to add more precise version of cuda as a tag prefix (so, we need to add a new tagger to cuda flavored images). People might want to (or be forced to) stay on 12.1 even when 12.2 pytorch-cuda is released.

So, the prefix tag will stay cuda12- (nothing to change here), but the final image can look something like jupyter/pytorch-notebook:cuda12-cuda12.1, so people will be to more precisely say they cuda version.

What do you think? I don't consider this to be a blocker for this PR, but it would definitely be nice to add this tag later.

Seems okay to add. However, it's also possible that pytorch might add a --index-url 'https://download.pytorch.org/whl/cu122' alongside the current --index-url 'https://download.pytorch.org/whl/cu121'. In that case image variants would have to be built for both versions. I think it might be less confusing to do something like this instead:

jupyter/pytorch-notebook:cuda12 (latest, so cuda12.2)
jupyter/pytorch-notebook:cuda12.2
jupyter/pytorch-notebook:cuda12.1

mathbunnyru · 2024-02-12T22:53:23Z

One more thought - I don't know a lot about cuda versioning, but it might be worth it to add more precise version of cuda as a tag prefix (so, we need to add a new tagger to cuda flavored images). People might want to (or be forced to) stay on 12.1 even when 12.2 pytorch-cuda is released.
So, the prefix tag will stay cuda12- (nothing to change here), but the final image can look something like jupyter/pytorch-notebook:cuda12-cuda12.1, so people will be to more precisely say they cuda version.
What do you think? I don't consider this to be a blocker for this PR, but it would definitely be nice to add this tag later.

Seems okay to add. However, it's also possible that pytorch might add a --index-url 'https://download.pytorch.org/whl/cu122' alongside the current --index-url 'https://download.pytorch.org/whl/cu121'. In that case image variants would have to be built for both versions. I think it might be less confusing to do something like this instead:

jupyter/pytorch-notebook:cuda12 (latest, so cuda12.2)

jupyter/pytorch-notebook:cuda12.2

jupyter/pytorch-notebook:cuda12.1

If you can implement this as purely a tag feature, and not a whole new image - then it would be great.
It might be easier to implement it as I mentioned though (adding a new tagger which adds a more explicit cuda version).

I don't want to have a separate image for each X.Y version of cuda.
We usually only support latest versions of packages.
In case of cuda it makes sense to support both cuda11 and cuda12, but having to always support cuda12.Y is too much.

images/pytorch-notebook/cuda11/Dockerfile

images/pytorch-notebook/cuda12/Dockerfile

mathbunnyru · 2024-02-14T09:24:18Z

@consideRatio @manics please, vote here: #2091 (comment)

I am ready to merge this before the vote deadline if I receive one more positive vote.

consideRatio

Thank you @johanna-reiml-hpi for working this so thoroughly!!!

A significant value for users

My experience is that installing CUDA next to PyTorch and/or Tensorflow can be a hurdle, so if this project takes on providing image variants of pytorch-notebook and/or tensorflow-notebook, its a big value for end users that doesn't have to do it themselves, but it could be a notable mainteannce burden for this project.

Vote to support CUDA ambitions for pytorch-notebook

I think the complexity addition and value tradeoff could be worth it, and since @mathbunnyru has voted 👍 who in does the most maintenance in this repo, I'm 👍 to seeing this repo committing to providing cuda variants.

Vote to drop CUDA ambitions for tensorflow-notebook

Since there is already issues getting CUDA and Tensorflow installed, I think it should be seen as an indication that its going to be a hurdle long term as well. My experience is that the tensorflow ecosystem is less user friendly for users installing it, and the experience reported by @johanna-reiml-hpi strengthen this belief.

Due to this, I suggest that jupyter/docker-stacks doesn't go for CUDA variants of tensorflow-notebook, thinking that is a maintenance burden that is too large. I understand pytorch is more popular than tensorflow, so its reasonable to invest more effort towards pytorch as well than tensorflow I think.

Misc PR review

CUDA variants policy

Supported architectures
I think right now, this only provides a x86_64 build of this image. If this PR is merged to only provide that, it would be good to clarify why not also aarch64. It would be good if its reflected also in the PR title if this is a x86_64 only feature.
Variant description
I understand that the variant is an image variant. I think it would be good if the description of variant flags clarifies that some images includes image variants, and that it will result in a tag suffix being appended.
PR title
- Update PR to not reference an issue in the title as its often not practically useful, its far easier if its instead referenced in the PR description as "fixes #..." or "partially resolves #..." as then its clickable for example.
- Example PR title: Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only)
CUDA policy
I think we should provide a maintenance constraining policy, describing that no more than the latest two major versions of CUDA will be supported, so when the next major version comes out and this projects builds it successfully, the project can stop building new images with CUDA 11. Having a note / policy about this could be good to have already.

mathbunnyru · 2024-02-21T20:01:20Z

Vote to drop CUDA ambitions for tensorflow-notebook

If someone manages to enable cuda-enabled tensorflow image for our docker stacks in a sane way (installing pip/mamba packages, no manual build), then it means that the ecosystem is mature enough for us to support it.
I won't be against merging such a change.
In any case, after merging this PR, it should be easy to experiment.

I mostly agree with @consideRatio's "Misc PR review" section - @johanna-reiml-hpi please, take a look.

Supported architectures

👍

Variant description

I prefer not to change anything here (I really like all the cuda11 image tags have a long common prefix like jupyter/pytorch-notebook:cuda11-)

PR Title

👍

Cuda policy

👍

consideRatio · 2024-02-21T20:30:28Z

Ah, i thought it was a suffix seeing f"{platform}-{variant}" somewhere, and that it should be seen as a suffix being put last there. But I think i misunderstood this and that its really a high prio prefix in the tag, so it makes sense to reference it as a prefix still.

I think the description could be improved on still though as i struggled to piece together things. Now i think something like "Some images has variants, they will be published with the same image name, but get a prefix added to the tag." could have been helpful to read somewhere.

mathbunnyru · 2024-02-24T10:18:06Z

The code is great, and the voting is also successful, so I am merging this one - I will add a policy and some documentation myself.

mathbunnyru · 2024-02-24T10:40:07Z

Done: https://github.com/jupyter/docker-stacks/pull/2097/files

mathbunnyru · 2024-02-24T11:04:27Z

New images are pushed and ready to use 🎉
https://quay.io/repository/jupyter/pytorch-notebook?tab=tags

mathbunnyru · 2024-02-24T20:40:32Z

@johanna-reiml-hpi thank you for this PR.
It's nice to have GPU enabled image at least for pytorch and I think variant feature might be used in other circumstances.

…ons only) (jupyter#2091) * feat: build cuda variants of pytorch * feat: build with variant tag * style: remove unused import * refactor: rename get_prefix params (cherry picked from commit 12b50af) * revert: drop ROOT_CONTAINER addition from Makefile (cherry picked from commit f423145) * style: use consistent three empty lines in Makefile (cherry picked from commit 446b45a) * refactor: add default value for parent-image (cherry picked from commit 32955ce) * revert: use original workflow structure (cherry picked from commit 68c6744) * refactor: use single build image step (cherry picked from commit 5f1ac0a) * fix: run merge tags regardless of repository owner (cherry picked from commit 3fce366) * refactor: build cuda12 instead of cuda tag (cherry picked from commit 217144e) * docs: add note about CUDA tags to documentation * refactor: add default value for variant in build-test-upload * refactor: swap ordering of cuda11/cuda12 variants * refactor: remove optional str type in arg parser * fix: add proper env variables to CUDA Dockerfiles * fix: remove CUDA build for aarch64 * fix: use latest NVIDIA documentation link * fix: skip aarch64 tags file for CUDA variants --------- Co-authored-by: zynaa <[email protected]>

johanna-reiml-hpi added 3 commits February 6, 2024 11:04

feat: build cuda variants of pytorch

43f2d32

feat: build with variant tag

6198575

style: remove unused import

95e4bb1

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zynaa added 9 commits February 11, 2024 22:20

refactor: rename get_prefix params

ba57a88

(cherry picked from commit 12b50af)

revert: drop ROOT_CONTAINER addition from Makefile

2ead783

(cherry picked from commit f423145)

style: use consistent three empty lines in Makefile

f320f07

(cherry picked from commit 446b45a)

refactor: add default value for parent-image

02b3609

(cherry picked from commit 32955ce)

revert: use original workflow structure

b7b5cfa

(cherry picked from commit 68c6744)

refactor: use single build image step

23044ce

(cherry picked from commit 5f1ac0a)

fix: run merge tags regardless of repository owner

e492b58

(cherry picked from commit 3fce366)

refactor: build cuda12 instead of cuda tag

74869cc

(cherry picked from commit 217144e)

docs: add note about CUDA tags to documentation

c48e8d2

johanna-reiml-hpi requested a review from mathbunnyru February 11, 2024 21:42

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zynaa added 3 commits February 12, 2024 21:52

refactor: add default value for variant in build-test-upload

d25dbbd

refactor: swap ordering of cuda11/cuda12 variants

173a006

refactor: remove optional str type in arg parser

be3fdb4

zynaa added 2 commits February 12, 2024 23:21

fix: add proper env variables to CUDA Dockerfiles

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fix: remove CUDA build for aarch64

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zynaa added 2 commits February 13, 2024 01:51

fix: use latest NVIDIA documentation link

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fix: skip aarch64 tags file for CUDA variants

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benz0li mentioned this pull request Feb 19, 2024

Add container images for the GPU version of TensorFlow and PyTorch Notebook #2095

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consideRatio reviewed Feb 19, 2024

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mathbunnyru changed the title ~~#1557 Add cuda tag prefix for pytorch-notebook~~ Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) Feb 24, 2024

mathbunnyru merged commit eccda24 into jupyter:main Feb 24, 2024
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mathbunnyru mentioned this pull request Mar 27, 2024

Build GPU Variants of Current Images #1557

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Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) #2091

Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) #2091

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Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) #2091

Add pytorch-notebook image variants with cuda 11 and 12 (x86_64 versions only) #2091

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Describe your changes

Issue ticket if applicable

Checklist (especially for first-time contributors)

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A significant value for users

Vote to support CUDA ambitions for pytorch-notebook

Vote to drop CUDA ambitions for tensorflow-notebook

Misc PR review

CUDA variants policy

mathbunnyru commented Feb 21, 2024

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