Update test #2
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on: | |
push: | |
pull_request: | |
types: | |
- synchronize | |
env: | |
# Python minimum version is used for testing xia2 | |
PYTHON_MINIMUM_VERSION: '3.9' | |
jobs: | |
build_test: | |
name: Build/Test | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu, macOS] | |
runs-on: ${{ matrix.os }}-latest | |
steps: | |
- name: Checkout Repository | |
uses: actions/checkout@v4 | |
with: | |
path: modules/xia2 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ env.PYTHON_MINIMUM_VERSION }} | |
- name: Install Base Environment | |
shell: bash | |
run: | | |
wget https://raw.githubusercontent.com/dials/dials/main/installer/bootstrap.py | |
python bootstrap.py update base --python "${{ env.PYTHON_MINIMUM_VERSION }}" | |
micromamba/micromamba install -p ./conda_base -c conda-forge -y \ | |
ninja dials-data pytest-azurepipelines pytest-cov pytest-timeout pytest-md | |
echo "$(pwd)/conda_base/bin" >> $GITHUB_PATH | |
- name: Build | |
env: | |
CMAKE_GENERATOR: Ninja | |
run: python bootstrap.py build | |
- name: Prepare for cache restoration | |
shell: bash | |
run: | | |
set -x | |
find . -name "dials.data*" | |
echo "DIALS_DATA_VERSION_FULL=$(dials.data info -v | grep version.full)" >> $GITHUB_ENV | |
echo "DIALS_DATA_VERSION=$(dials.data info -v | grep version.major_minor)" >> $GITHUB_ENV | |
echo "DIALS_DATA=${PWD}/data" >> $GITHUB_ENV | |
echo "CURRENT_WEEK=$(date +W%W)" >> $GITHUB_ENV | |
echo "TODAY_ISO=$(date +%Y%m%d)" >> $GITHUB_ENV | |
- name: Restore Cache | |
uses: actions/cache@v4 | |
with: | |
key: ${{ env.CURRENT_WEEK }}-${{ env.DIALS_DATA_VERSION }}-${{ env.TODAY_ISO }}-${{ env.DIALS_DATA_VERSION_FULL }} | |
restore-keys: | | |
${{ env.CURRENT_WEEK }}-${{ env.DIALS_DATA_VERSION }}-${{ env.TODAY_ISO }}- | |
${{ env.CURRENT_WEEK }}-${{ env.DIALS_DATA_VERSION }}- | |
path: ${{ github.workspace }}/data | |
- name: Run pytest | |
uses: pavelzw/pytest-action@510c5e90c360a185039bea56ce8b3e7e51a16507 # v2.2.0 | |
with: | |
verbose: true | |
emoji: false | |
job-summary: true | |
custom-arguments: modules/xia2 --regression --regression-full --timeout=5400 | |
click-to-expand: true |