Skip to content
CLA 🔏

🗃️ Decorators feature branch #1098

Sign in to view logs

🗃️ Decorators feature branch

🗃️ Decorators feature branch #1098

Triggered via pull request December 13, 2024 15:41
@averissimoaverissimo
synchronize #1252
Status Success
Total duration 18s
Artifacts –

cla.yaml

on: pull_request_target
CLA 📝  /  CLAssistant
5s
CLA 📝 / CLAssistant
Fit to window
Zoom out
Zoom in

Annotations

97 warnings
CLA 📝 / CLAssistant
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
1 out of 2 runs failed: template_a_gee_t_gee_cov_table_works_as_expected_with_default_input (tm_a_gee): tm_a_gee#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_a_gee_t_gee_coef_table_works_as_expected_with_default_input (tm_a_gee): tm_a_gee#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_a_gee_works_as_expected_with_non_default_reference_arm (tm_a_gee): tm_a_gee#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_a_gee_works_as_expected_when_arm_is_not_considered_in_the_model (tm_a_gee): tm_a_gee#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mmrm_tables_works_as_expected (tm_a_mmrm): tm_a_mmrm#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mmrm_tables_works_as_expected_when_arm_is_not_considered_in_the_model (tm_a_mmrm): tm_a_mmrm#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: 1._and_2._Mean_and_95_CIs_for_mean (tm_g_ci): tm_g_ci#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: 3._Confidence_Interval_Plot_using_different_stratification_variable_ (tm_g_ci): tm_g_ci#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: 4._Median_and_95_CIs_for_median (tm_g_ci): tm_g_ci#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: 5._Using_different_alpha_level (tm_g_ci): tm_g_ci#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_forest_rsp_generates_correct_expressions (tm_g_forest_rsp): tm_g_forest_rsp#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_forest_rsp_works_with_risk_difference_column_added (tm_g_forest_rsp): tm_g_forest_rsp#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_forest_tte_generates_correct_expressions (tm_g_forest_tte): tm_g_forest_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_forest_tte_works_with_risk_difference_column_added (tm_g_forest_tte): tm_g_forest_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_g_km_works_as_expected_with_default_arguments (tm_g_km): tm_g_km#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_g_km_gives_correct_data_expression_when_we_want_to_compare_versus_reference_arms (tm_g_km): tm_g_km#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_g_km_gives_correct_data_expression_when_we_want_to_combine_comparison_arms (tm_g_km): tm_g_km#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_g_lineplot_works_as_expected_with_default_arguments (tm_g_lineplot): tm_g_lineplot#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_g_lineplot_gives_correct_data_expression_with_custom_arguments (tm_g_lineplot): tm_g_lineplot#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_abnormality_generates_correct_expressions_with_default_arguments (tm_t_abnormality): tm_t_abnormality#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_abnormality_generates_correct_expressions_with_custom_arguments (tm_t_abnormality): tm_t_abnormality#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_abnormality_generates_correct_expressions_with_customized_na_level (tm_t_abnormality): tm_t_abnormality#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_abnormality_by_worst_grade_generates_correct_expressions_with_default_arguments (tm_t_abnormality_by_worst_grade): tm_t_abnormality_by_worst_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_abnormality_by_worst_grade_generates_correct_expressions_with_custom_arguments (tm_t_abnormality_by_worst_grade): tm_t_abnormality_by_worst_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
2 out of 4 runs failed: template_ancova_generates_expressions_with_multiple_endpoints (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_ancova_generates_expressions_with_multiple_endpoints_with_combined_comparison_arms (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_ancova_generates_expressions_with_multiple_endpoints_with_combined_reference_arms (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_ancova_generates_expressions_with_single_endpoint (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_ancova_generates_expressions_with_discrete_interaction_variable (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_ancova_generates_expressions_with_continuous_interaction_variable (tm_t_ancova): tm_t_ancova#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_generates_standard_expressions (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_generates_right_expressions_with_non_default (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_generates_expression_without_arm_comparison (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_generates_expression_with_non_default_controls_and_strata. (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_can_combine_comparison_arms (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_can_combine_comparison_arms_when_compare_arms_is_FALSE (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_binary_outcome_can_combine_refs (tm_t_binary_outcome): tm_t_binary_outcome#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_coxreg_generates_correct_univariate_cox_regression_expressions (tm_t_coxreg): tm_t_coxreg#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_coxreg_generates_correct_univariate_cox_regression_expressions_with_interactions (tm_t_coxreg): tm_t_coxreg#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_coxreg_generates_correct_multivariate_cox_regression_expressions (tm_t_coxreg): tm_t_coxreg#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_generates_correct_expressions (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_generates_correct_expressions_for_nested_columns (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_can_generate_customized_table (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_can_generate_customized_table_with_alphabetical_sorting (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_can_generate_customized_table_with_pruning (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_can_generate_customized_table_with_pruning_for_nested_column (tm_t_events): tm_t_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_by_grade_generates_standard_expressions (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_by_grade_generates_standard_expressions_with_pruning_conditions (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_by_grade_without_adding_total_column_option_works_as_expected (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_by_grade_with_hlt_only_works (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_col_by_grade_generates_standard_expressions (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_col_by_grade_works_with_custom_values (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_col_by_grade_without_adding_total_column_option_works_as_expected (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_col_by_grade_without_dropping_arm_levels_option_works_as_expected (tm_t_events_by_grade): tm_t_events_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_patyear_generates_standard_expressions (tm_t_events_patyear): tm_t_events_patyear#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_patyear_generates_right_expressions_with_non_default (tm_t_events_patyear): tm_t_events_patyear#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_patyear_generates_right_expressions_with_non_default_controls (tm_t_events_patyear): tm_t_events_patyear#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_summary_generates_minimal_table (tm_t_events_summary): tm_t_events_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_events_summary_generates_table_with_multiple_flags (tm_t_events_summary): tm_t_events_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_exposure_generates_correct_expressions_with_default_arguments (tm_t_exposure): tm_t_exposure#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_exposure_generates_correct_expressions_with_custom_arguments (tm_t_exposure): tm_t_exposure#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_exposure_generates_correct_expressions_with_paramcd_label (tm_t_exposure): tm_t_exposure#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
2 out of 4 runs failed: template_logistic_generates_correct_expressions (tm_t_logisitic): tm_t_logisitic#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_logistic_generates_correct_expressions_for_no_arm_variable (tm_t_logisitic): tm_t_logisitic#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_1_HLT_parameter (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_2_HLT_parameters_and_drop_arm_levels_FALSE (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_3_HLT_parameters (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_4_HLT_parameters (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_no_HLT_parameters (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_mult_events_generates_correct_expressions_with_1_HLT_parameter_and_without_All_Patients_column (tm_t_mult_events): tm_t_mult_events#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 3 runs failed: template_medical_history_non_default_parameters (tm_t_pp_medical_history): tm_t_pp_medical_history#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_default_arguments (tm_t_shift_by_arm): tm_t_shift_by_arm#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_add_total_being_TRUE (tm_t_shift_by_arm): tm_t_shift_by_arm#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_na.rm_being_TRUE (tm_t_shift_by_arm): tm_t_shift_by_arm#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_default_arguments (tm_t_shift_by_arm_by_worst): tm_t_shift_by_arm_by_worst#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_add_total_being_TRUE (tm_t_shift_by_arm_by_worst): tm_t_shift_by_arm_by_worst#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_arm_generates_correct_expressions_with_na.rm_being_TRUE (tm_t_shift_by_arm_by_worst): tm_t_shift_by_arm_by_worst#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_grade_generates_correct_expressions_with_default_arguments (tm_t_shift_by_grade): tm_t_shift_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_shift_by_grade_generates_correct_expressions_with_custom_arguments (tm_t_shift_by_grade): tm_t_shift_by_grade#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_smq_generates_correct_expressions_with_default_arguments (tm_t_smq): tm_t_smq#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_smq_generates_correct_expressions_with_custom_arguments (tm_t_smq): tm_t_smq#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_generates_correct_expressions (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_can_generate_customized_table (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_generates_correct_expressions_for_multiple_grouping_variables (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_generates_correct_expressions_for_multiple_grouping_variables_and_all_patients (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_generates_correct_expressions_for_customized_numeric_statistics (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_generates_correct_expressions_when_arm_variable_labels_are_added (tm_t_summary): tm_t_summary#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_by_generates_correct_expressions (tm_t_summary_by): tm_t_summary_by#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_by_generates_correct_expressions_when_parallel_vars_is_true (tm_t_summary_by): tm_t_summary_by#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_by_generates_correct_expressions_when_row_groups_is_true (tm_t_summary_by): tm_t_summary_by#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_by_generates_correct_expressions_for_customized_numeric_statistics (tm_t_summary_by): tm_t_summary_by#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_summary_by_generates_correct_expressions_for_drop_zero_levels_is_true (tm_t_summary_by): tm_t_summary_by#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_tte_produces_healthy_standard_output (tm_t_tte): tm_t_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_tte_produces_correct_data_expression_when_not_comparing_arms (tm_t_tte): tm_t_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_tte_produces_correct_data_expression_when_comparing_and_combining_arms (tm_t_tte): tm_t_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]
1 out of 2 runs failed: template_tte_produces_correct_data_expression_when_comparing_arms (tm_t_tte): tm_t_tte#L0
teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]