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ifoxfoot committed Sep 21, 2023
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2 changes: 1 addition & 1 deletion README.Rmd
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# fqacalc <img src="man/figures/fqacalc.png" align="right" height="138">

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[![](https://cranlogs.r-pkg.org/badges/grand-total/fqacalc)](https://cran.r-project.org/package=fqacalc)
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44 changes: 25 additions & 19 deletions README.md
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[![R-CMD-check](https://github.com/ifoxfoot/fqacalc/workflows/R-CMD-check/badge.svg)](https://github.com/ifoxfoot/fqacalc/workflows/R-CMD-check/badge.svg)
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[![](https://cranlogs.r-pkg.org/badges/grand-total/fqacalc)](https://cran.r-project.org/package=fqacalc)
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Expand Down Expand Up @@ -64,12 +64,9 @@ view one of the regional databases.
``` r
#view a list of all available databases
head(db_names()$fqa_db)
#> [1] "atlantic_coastal_pine_barrens_2018"
#> [2] "chicago_region_2017"
#> [3] "colorado_2020"
#> [4] "dakotas_excluding_black_hills_2017"
#> [5] "delaware_2013"
#> [6] "eastern_great_lakes_hudson_lowlands_2018"
#> [1] "appalachian_mountains_2013" "atlantic_coastal_pine_barrens_2018"
#> [3] "chicago_region_2017" "coastal_plain_southeast_2013"
#> [5] "colorado_2020" "dakotas_excluding_black_hills_2017"

#NOTE citations for lists can be viewed using db_names()$citation

Expand All @@ -78,18 +75,27 @@ colorado <- view_db("colorado_2020")

#view it
head(colorado)
#> # A tibble: 6 × 13
#> name name_origin acronym accepted_scientific_…¹ family nativity c w
#> <chr> <chr> <chr> <chr> <chr> <chr> <dbl> <dbl>
#> 1 ABIES … accepted_s… ABBI3 Abies bifolia Pinac… native 5 1
#> 2 ABIES … synonym <NA> Abies bifolia Pinac… native 5 1
#> 3 ABIES … accepted_s… ABCO Abies concolor Pinac… native 5 NA
#> 4 ABRONI… accepted_s… ABEL Abronia elliptica Nycta… native 4 NA
#> 5 ABRONI… accepted_s… ABFR2 Abronia fragrans Nycta… native 6 NA
#> 6 ABRONI… accepted_s… ABAR Abronia glabrifolia Nycta… native 9 NA
#> # ℹ abbreviated name: ¹​accepted_scientific_name
#> # ℹ 5 more variables: wetland_indicator <chr>, physiognomy <chr>,
#> # duration <chr>, common_name <chr>, fqa_db <chr>
#> name name_origin acronym accepted_scientific_name
#> 1 ABIES BIFOLIA accepted_scientific_name ABBI3 Abies bifolia
#> 2 ABIES LASIOCARPA synonym <NA> Abies bifolia
#> 3 ABIES CONCOLOR accepted_scientific_name ABCO Abies concolor
#> 4 ABRONIA ELLIPTICA accepted_scientific_name ABEL Abronia elliptica
#> 5 ABRONIA FRAGRANS accepted_scientific_name ABFR2 Abronia fragrans
#> 6 ABRONIA GLABRIFOLIA accepted_scientific_name ABAR Abronia glabrifolia
#> family nativity c w wetland_indicator physiognomy duration
#> 1 Pinaceae native 5 1 FACU tree perennial
#> 2 Pinaceae native 5 1 FACU tree perennial
#> 3 Pinaceae native 5 NA <NA> tree perennial
#> 4 Nyctaginaceae native 4 NA <NA> forb perennial
#> 5 Nyctaginaceae native 6 NA <NA> forb perennial
#> 6 Nyctaginaceae native 9 NA <NA> forb perennial
#> common_name fqa_db
#> 1 <NA> colorado_2020
#> 2 <NA> colorado_2020
#> 3 <NA> colorado_2020
#> 4 <NA> colorado_2020
#> 5 <NA> colorado_2020
#> 6 <NA> colorado_2020
```

`fqacalc` also comes with sample inventory data from Crooked Island,
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