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Gengetopt parser #6

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pfasante
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this PR implements the gengetopt parser discussed in issue #3

this commit start working on issue iaikkrypto#3, replace commandlineParser with a
parser generated by gengetopt.
not all code depending on the initial commandlineParser is changed, so
in this commit we have both variants..
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If you like to merge PR #5, I can adjust this PR to use cmake accordingly.

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