main

improve intensity normalization by stretching 3*stddev around the median #24

	name: main

	on:
	push:
	branches-ignore:
	- "dependabot/**"
	pull_request:
	types: [opened, reopened, synchronize]
	paths-ignore:
	- '**.md'

	env:
	PIP_DISABLE_PIP_VERSION_CHECK: 1

	concurrency:
	group: ${{ github.head_ref \|\| github.run_id }}
	cancel-in-progress: true

	jobs:
	test:
	name: test
	runs-on: ubuntu-latest
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- name: Checkout repository
	uses: actions/checkout@v3
	- uses: conda-incubator/setup-miniconda@v2
	with:
	miniforge-version: latest
	miniforge-variant: Mambaforge
	environment-file: environment.yml
	auto-update-conda: false
	python-version: "3.11"
	- name: "Install Trenchrun"
	run: pip install .
	- name: 'Debug Info'
	run: \|
	echo python location: `which python`
	echo python version: `python --version`
	echo pytest location: `which pytest`
	echo installed packages
	conda list
	pip list

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