Fix dictionary service path

hms-dbmi · Nov 19, 2024 · dc0ebe3 · dc0ebe3
1 parent da8df75
commit dc0ebe3
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/...main/java/edu/harvard/hms/dbmi/avillach/hpds/processing/dictionary/DictionaryService.java b/...main/java/edu/harvard/hms/dbmi/avillach/hpds/processing/dictionary/DictionaryService.java
@@ -32,6 +32,6 @@ public DictionaryService(@Value("${dictionary.host}") String dictionaryHostTempl
     }
 
     public List<Concept> getConcepts(List<String> conceptPaths) {
-        return restTemplate.exchange(dictionaryHost + "/picsure/proxy/dictionary-api/concepts/detail/", HttpMethod.POST, new HttpEntity<>(conceptPaths), CONCEPT_LIST_TYPE_REFERENCE).getBody();
+        return restTemplate.exchange(dictionaryHost + "/pic-sure-api-2/PICSURE/proxy/dictionary-api/concepts/detail", HttpMethod.POST, new HttpEntity<>(conceptPaths), CONCEPT_LIST_TYPE_REFERENCE).getBody();
     }
 }
diff --git a/processing/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/processing/io/PfbWriter.java b/processing/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/processing/io/PfbWriter.java
@@ -132,7 +132,7 @@ private void writeDrsUris() {
             conceptMap = dictionaryService.getConcepts(originalFields).stream()
                     .collect(Collectors.toMap(Concept::conceptPath, Function.identity()));
         } catch (RuntimeException e) {
-            log.error("Error fetching DRS URIs from dictionary service");
+            log.error("Error fetching DRS URIs from dictionary service", e);
         }
 
         for (int i = 0; i < formattedFields.size(); i++) {
@@ -144,7 +144,8 @@ private void writeDrsUris() {
             if (concept != null) {
                 Map<String, String> meta = concept.meta();
                 if (meta != null) {
-                    drsUris = meta.values().stream().toList();
+                    drsUris = new ArrayList<>(meta.keySet().stream().toList());
+                    drsUris.addAll(meta.values().stream().toList());
                 }
             }
             drsUriData.put("drs_uri", drsUris);