rebase onto main and update with changes

heracles/cli.py

@@ -31,10 +31,10 @@
 
 # valid option keys
 FIELD_TYPES = {
-    "positions": "heracles.maps:PositionMap",
-    "shears": "heracles.maps:ShearMap",
-    "visibility": "heracles.maps:VisibilityMap",
-    "weights": "heracles.maps:WeightMap",
+    "positions": "heracles.fields:Positions",
+    "shears": "heracles.fields:Shears",
+    "visibility": "heracles.fields:Visibility",
+    "weights": "heracles.fields:Weights",
 }
 
 
@@ -152,8 +152,8 @@ def subsections(self, group: str) -> dict[str, str]:
         return {s.rpartition(":")[-1].strip(): s for s in sections}
 
 
-def map_from_config(config, section):
-    """Construct a map instance from config."""
+def field_from_config(config, section):
+    """Construct a field instance from config."""
 
     from pkgutil import resolve_name
 
@@ -176,11 +176,11 @@ def map_from_config(config, section):
     return cls(nside, *columns)
 
 
-def maps_from_config(config, group="fields"):
-    """Construct all map instances from config."""
+def fields_from_config(config, group="fields"):
+    """Construct all field instances from config."""
     sections = config.subsections(group)
     return {
-        name: map_from_config(config, section) for name, section in sections.items()
+        name: field_from_config(config, section) for name, section in sections.items()
     }
 
 
@@ -364,7 +364,7 @@ def map_all_selections(
 ) -> Iterator:
     """Iteratively map the catalogues defined in config."""
 
-    from .maps import map_catalogs
+    from .fields import map_catalogs
 
     # turn groups into a deduplicated sequence
     if groups is None:
@@ -374,13 +374,13 @@ def map_all_selections(
     else:
         groups = list(dict.fromkeys(groups))
 
-    # load catalogues and maps to process
+    # load catalogues and fields to process
     catalogs = catalogs_from_config(config)
-    maps = {}
+    fields = {}
     for group in groups:
-        maps |= maps_from_config(config, group)
+        fields |= fields_from_config(config, group)
 
-    logger.info("mapping %s", ", ".join(map(repr, maps)))
+    logger.info("fields %s", ", ".join(map(repr, fields)))
 
     # process each catalogue separately into maps
     for key, catalog in catalogs.items():
@@ -393,7 +393,7 @@ def map_all_selections(
 
         # maps for single catalogue
         yield map_catalogs(
-            maps,
+            fields,
             {key: catalog},
             parallel=True,  # no effect but prettier log output
             progress=True,
@@ -464,8 +464,8 @@ def alms(
 
     """
 
+    from .fields import transform_maps
     from .io import AlmFits
-    from .maps import transform_maps
 
     # load the config file, this contains alms setting and maps definition
     logger.info("reading configuration from %s", files)

pyproject.toml

@@ -116,3 +116,6 @@ all = true
 spaces_indent_inline_array = 4
 trailing_comma_inline_array = true
 overrides."project.classifiers".inline_arrays = false
+
+[project.scripts]
+heracles = "heracles.cli:main"