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Rule makeHtmlSummaryDashboard fails complaining about missing columns #3

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emi80 opened this issue Jul 28, 2022 · 0 comments
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@emi80
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emi80 commented Jul 28, 2022

This is the error message:

Error: Can't subset columns that don't exist.✖ Column `intron.x` doesn't exist.Backtrace:     █  1. ├─dplyr::relocate(ntCoverageStats, intron.x, .after = exonOfPseudo.y)  2. ├─dplyr:::relocate.data.frame(ntCoverageStats, intron.x, .after = exonOfPseudo.y)  3. │ ├─base::unname(tidyselect::eval_select(expr(c(...)), .data))  4. │ └─tidyselect::eval_select(expr(c(...)), .data)  5. │   └─tidyselect:::eval_select_impl(...)  6. │     ├─tidyselect:::with_subscript_errors(...)  7. │     │ ├─base::tryCatch(...)  8. │     │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)  9. │     │ │   └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]]) 10. │     │ │     └─base:::doTryCatch(return(expr), name, parentenv, handler)
 11. │     │ └─tidyselect:::instrument_base_errors(expr)
 12. │     │   └─base::withCallingHandlers(...)
 13. │     └─tidyselect:::vars_select_eval(...)
 14
Execution halted
Error: Can't subset columns that don't exist.
✖ Column `intron.x` doesn't exist.
Backtrace:
     █
  1. ├─dplyr::relocate(ntCoverageStats, intron.x, .after = exonOfPseudo.y)
  2. ├─dplyr:::relocate.data.frame(ntCoverageStats, intron.x, .after = exonOfPseudo.y)
  3. │ ├─base::unname(tidyselect::eval_select(expr(c(...)), .data))
  4. │ └─tidyselect::eval_select(expr(c(...)), .data)
  5. │   └─tidyselect:::eval_select_impl(...)
  6. │     ├─tidyselect:::with_subscript_errors(...)
  7. │     │ ├─base::tryCatch(...)
  8. │     │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
  9. │     │ │   └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
 10. │     │ │     └─base:::doTryCatch(return(expr), name, parentenv, handler)
 11. │     │ └─tidyselect:::instrument_base_errors(expr)
 12. │     │   └─base::withCallingHandlers(...)
 13. │     └─tidyselect:::vars_select_eval(...)
 14
Execution halted
[Thu Jul 28 18:08:30 2022]
Error in rule makeHtmlSummaryDashboard
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