README

This repository contains code used for validation of long-read Saccharomyces cerevisiae genome assemblies for the manuscript:

Long-read genomes reveal pangenomic variation underlying yeast phenotypic diversity

Cory A. Weller¹², Ilya Andreev¹³², Michael Chambers¹, Morgan Park⁴, NISC Comparative Sequencing Program⁴, Joshua S. Bloom⁵⁶⁷⁸⁹, Meru J. Sadhu¹

Footnotes

1. Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA. ↩ ↩² ↩³ ↩⁴

2. These authors contributed equally to this work. ↩ ↩²

3. Present address: Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. ↩

4. NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA. ↩ ↩²

5. Department of Human Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA. ↩

6. Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA. ↩

7. Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA. ↩

8. Institute for Quantitative and Computational Biology, University of California, Los Angeles, Los Angeles, CA 90095, USA. ↩

9. Department of Computational Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA. ↩