Release v3.3.2 #33
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Release v3.3.2 #33
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* tool for pycaret classification * set system_log to False since pycaret would print process log to stderr and made the Galaxy jobs failed * dashboard only for test data The dashboard function from Pycaret will return a running dashboard but only need the html for now. so I write a custom dashboard function generate_dashboard() * Used smart_report * clean up the code * added model to outputs
* add regression restructure classes * better html report
This reverts commit 7153f43.
* added a section for contributors * added two steps * add more details * added git commands * added where to create bugfix brach
pycaret will add a .pkl extension to the file, so we don't need to do that
replicate the brach from exp-parameter-setup
* updates for pr actions 1. formart for planemo test and lint, and flask8 lint 2. found and fixed bugs during planemo test 3. added test-data files * Create .shed.yml * add details to .shed.yml * importing order * importing order * updated pr.yaml and import order 1 for pr.yaml: commend checking file-size for now 2. import order again
* added model selection and tested * changed expected test outputs since the new docker image/pycaret with extra models, the results have been changed
* init feature_importance * integrate result into comparing result * changed the title of plots * changed for flask8 * resolved bugs and added tests for best_model.csv * updated the test file * clear for lint
* init commit * integrated explainer into classification report * finished explainer into report * changed test file
* added input of random seed * flake8 linting * added random seed for testing * passed the tests * planemo lint
* some improvements 1. rename AUC to ROC-AUC 2. add <hr> to divide different plots * added description for setup * corrected the code for PR-AUC * results on testing set * added testset as an option * resolved a bug in feature importance ana * change input of feature importance * python lint * update the testing files due to changes * lint
* pdf/md evaluation report just for recording -- html version will be pushed next * finished the evaluation/prediction tool * lint * xml lint
* updated back to 3.3.2 latest version includes pdf related packages and we don't need them now * delated unnecessary dependencies * lint * removed extra_file in tests * added help info
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