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@girke-lab

Girke Lab

Research and Teaching Repos

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  1. ChemmineR ChemmineR Public

    Forked from TylerBackman/ChemmineR

    Cheminformatics Toolkit for R

    R 13 7

  2. bioassayR bioassayR Public

    Cross-target analysis of small molecule bioactivity - This is the official development repository

    R 5 2

  3. fmcsR fmcsR Public

    Mismatch Tolerant Maximum Common Substructure Searching

    C++ 5

  4. signatureSearch signatureSearch Public

    R/Bioconductor package including the Gene Expression Signature Search (GESS), Function Enrichment Analysis (FEA) methods and supporting drug-target network construction for visualization

    R 17 4

  5. signatureSearchData signatureSearchData Public

    Reference datasets used by the associated signatureSearch software package

    R 5 2

  6. customCMPdb customCMPdb Public

    Query and customization interface for compound annotation database from DrugAge, DrugBank, CMAP02 and LINCS databases. It also stores the structure SDF datasets for compounds in the above four data…

    R 2

Repositories

Showing 10 of 25 repositories
  • bioassayR Public

    Cross-target analysis of small molecule bioactivity - This is the official development repository

    girke-lab/bioassayR’s past year of commit activity
    R 5 2 0 0 Updated Oct 22, 2024
  • ChemmineR Public Forked from TylerBackman/ChemmineR

    Cheminformatics Toolkit for R

    girke-lab/ChemmineR’s past year of commit activity
    R 13 9 1 0 Updated Sep 26, 2024
  • ChemmineOB Public

    OpenBabel wrapper package for R

    girke-lab/ChemmineOB’s past year of commit activity
    C++ 10 6 4 2 Updated Aug 2, 2024
  • signatureSearch Public

    R/Bioconductor package including the Gene Expression Signature Search (GESS), Function Enrichment Analysis (FEA) methods and supporting drug-target network construction for visualization

    girke-lab/signatureSearch’s past year of commit activity
    R 17 4 1 0 Updated Feb 16, 2024
  • drugTargetInteractions Public
    girke-lab/drugTargetInteractions’s past year of commit activity
    R 1 0 1 0 Updated Oct 31, 2023
  • eiR Public

    Accelerated similarity searching of small molecules (bioconductor package)

    girke-lab/eiR’s past year of commit activity
    R 3 0 2 0 Updated Apr 14, 2023
  • chemminetools-docs Public
    girke-lab/chemminetools-docs’s past year of commit activity
    SCSS 0 MIT 0 0 4 Updated Apr 11, 2023
  • signatureSearchData Public

    Reference datasets used by the associated signatureSearch software package

    girke-lab/signatureSearchData’s past year of commit activity
    R 5 2 0 0 Updated Apr 5, 2023
  • chemminetools Public

    ChemMine Tools: open source web framework for small molecule analysis

    girke-lab/chemminetools’s past year of commit activity
    JavaScript 36 17 37 5 Updated Dec 8, 2022
  • customCMPdb Public

    Query and customization interface for compound annotation database from DrugAge, DrugBank, CMAP02 and LINCS databases. It also stores the structure SDF datasets for compounds in the above four databases.

    girke-lab/customCMPdb’s past year of commit activity
    R 2 0 0 0 Updated Feb 1, 2022
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