Major cleanup of example data and unnecessary svg images. Added gitig…

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gecos-lab · Apr 23, 2024 · 539257e · 539257e
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diff --git a/.gitignore b/.gitignore
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+development/**/*.svg
+fracability/**/*.svg
diff --git a/.../Survival_percentage_tests/circle_test.py → .../Survival_percentage_tests/circle_test.py b/.../Survival_percentage_tests/circle_test.py → .../Survival_percentage_tests/circle_test.py
diff --git a/...Survival_percentage_tests/discr_interp.py → ...Survival_percentage_tests/discr_interp.py b/...Survival_percentage_tests/discr_interp.py → ...Survival_percentage_tests/discr_interp.py
diff --git a/...engths_iter_lognorm_sample_avg_geom_nn.py → ...engths_iter_lognorm_sample_avg_geom_nn.py b/...engths_iter_lognorm_sample_avg_geom_nn.py → ...engths_iter_lognorm_sample_avg_geom_nn.py
diff --git a/...iter_lognorm_sample_avg_geom_nn_linear.py → ...iter_lognorm_sample_avg_geom_nn_linear.py b/...iter_lognorm_sample_avg_geom_nn_linear.py → ...iter_lognorm_sample_avg_geom_nn_linear.py
diff --git a/...random_lengths_2fixedseed_iter_lognorm.py → ...random_lengths_2fixedseed_iter_lognorm.py b/...random_lengths_2fixedseed_iter_lognorm.py → ...random_lengths_2fixedseed_iter_lognorm.py
diff --git a/...ths_2fixedseed_iter_lognorm_sample_avg.py → ...ths_2fixedseed_iter_lognorm_sample_avg.py b/...ths_2fixedseed_iter_lognorm_sample_avg.py → ...ths_2fixedseed_iter_lognorm_sample_avg.py
diff --git a/...ter_lognorm_sample_avg_change_mean_std.py → ...ter_lognorm_sample_avg_change_mean_std.py b/...ter_lognorm_sample_avg_change_mean_std.py → ...ter_lognorm_sample_avg_change_mean_std.py
diff --git a/...test_random_lengths_2fixedseed_lognorm.py → ...test_random_lengths_2fixedseed_lognorm.py b/...test_random_lengths_2fixedseed_lognorm.py → ...test_random_lengths_2fixedseed_lognorm.py
diff --git a/...m_lengths_iter_lognorm_sample_avg_geom.py → ...m_lengths_iter_lognorm_sample_avg_geom.py b/...m_lengths_iter_lognorm_sample_avg_geom.py → ...m_lengths_iter_lognorm_sample_avg_geom.py
diff --git a/...om_lengths_iter_lognorm_sample_avg_lin.py → ...om_lengths_iter_lognorm_sample_avg_lin.py b/...om_lengths_iter_lognorm_sample_avg_lin.py → ...om_lengths_iter_lognorm_sample_avg_lin.py
diff --git a/...lengths_2fixedseed_iter_exp_sample_avg.py → ...lengths_2fixedseed_iter_exp_sample_avg.py b/...lengths_2fixedseed_iter_exp_sample_avg.py → ...lengths_2fixedseed_iter_exp_sample_avg.py
diff --git a/...ts/normal/multiple_test_random_lengths.py → ...ts/normal/multiple_test_random_lengths.py b/...ts/normal/multiple_test_random_lengths.py → ...ts/normal/multiple_test_random_lengths.py
diff --git a/...ultiple_test_random_lengths_2fixedseed.py → ...ultiple_test_random_lengths_2fixedseed.py b/...ultiple_test_random_lengths_2fixedseed.py → ...ultiple_test_random_lengths_2fixedseed.py
diff --git a/...le_test_random_lengths_2fixedseed_iter.py → ...le_test_random_lengths_2fixedseed_iter.py b/...le_test_random_lengths_2fixedseed_iter.py → ...le_test_random_lengths_2fixedseed_iter.py
diff --git a/...dom_lengths_2fixedseed_iter_sample_avg.py → ...dom_lengths_2fixedseed_iter_sample_avg.py b/...dom_lengths_2fixedseed_iter_sample_avg.py → ...dom_lengths_2fixedseed_iter_sample_avg.py
diff --git a/...tiple_test_random_lengths_random_start.py → ...tiple_test_random_lengths_random_start.py b/...tiple_test_random_lengths_random_start.py → ...tiple_test_random_lengths_random_start.py
diff --git a/...t_random_lengths_random_start_2fixseed.py → ...t_random_lengths_random_start_2fixseed.py b/...t_random_lengths_random_start_2fixseed.py → ...t_random_lengths_random_start_2fixseed.py
diff --git a/...tage_tests/multiple_censor/survp_2_20.png → ...tage_tests/multiple_censor/survp_2_20.png b/...tage_tests/multiple_censor/survp_2_20.png → ...tage_tests/multiple_censor/survp_2_20.png
diff --git a/.../single_censor/single_test_random_ends.py → .../single_censor/single_test_random_ends.py b/.../single_censor/single_test_random_ends.py → .../single_censor/single_test_random_ends.py
diff --git a/...ngle_censor/single_test_random_lengths.py → ...ngle_censor/single_test_random_lengths.py b/...ngle_censor/single_test_random_lengths.py → ...ngle_censor/single_test_random_lengths.py
diff --git a/...sor/single_test_random_lengths_lognorm.py → ...sor/single_test_random_lengths_lognorm.py b/...sor/single_test_random_lengths_lognorm.py → ...sor/single_test_random_lengths_lognorm.py
diff --git a/...ingle_test_random_lengths_random_start.py → ...ingle_test_random_lengths_random_start.py b/...ingle_test_random_lengths_random_start.py → ...ingle_test_random_lengths_random_start.py
diff --git a/.../tests/Survival_percentage_tests/space.py → ...opment/Survival_percentage_tests/space.py b/.../tests/Survival_percentage_tests/space.py → ...opment/Survival_percentage_tests/space.py
diff --git a/...l_percentage_tests/survival_validation.py → ...l_percentage_tests/survival_validation.py b/...l_percentage_tests/survival_validation.py → ...l_percentage_tests/survival_validation.py
diff --git a/...rvival_percentage_tests/test_lognormal.py → ...rvival_percentage_tests/test_lognormal.py b/...rvival_percentage_tests/test_lognormal.py → ...rvival_percentage_tests/test_lognormal.py
diff --git a/...vival_percentage_tests/test_random_gen.py → ...vival_percentage_tests/test_random_gen.py b/...vival_percentage_tests/test_random_gen.py → ...vival_percentage_tests/test_random_gen.py
diff --git a/development/analysis_output.csv b/development/analysis_output.csv
@@ -0,0 +1,8 @@
+,dist_name,AIC,delta_i,w_i,weight_ratios,KS,KG,AD,AIC rank,KS rank,KG rank,AD rank
+0,gengamma,4500.7952966366865,0.0,0.8380607148,1.0,0.02498824807257105,0.13429321941760008,0.9065567173722684,1.0,2.0,1.0,1.0
+1,lognorm,4504.083034772508,3.2877381358212006,0.1619392852,5.1751538471036795,0.022858662675106278,0.13887125976793868,0.9352826785504931,2.0,1.0,2.0,2.0
+2,gamma,4578.5617982749445,77.76650163825798,0.0,inf,0.06457202675406004,1.4403266371082282,9.478035728037867,3.0,5.0,5.0,5.0
+3,expon,4588.764357698047,87.96906106136066,0.0,inf,0.05591712517563774,1.2180276321975043,9.258351579241207,4.0,3.0,3.0,3.0
+4,weibull_min,4588.837930571675,88.04263393498877,0.0,inf,0.05921218381192461,1.2985659998595338,9.30670992520163,5.0,4.0,4.0,4.0
+5,logistic,5381.116487467149,880.3211908304629,0.0,inf,0.16112452706948086,6.041640044822202,58.8823611714115,6.0,6.0,6.0,6.0
+6,norm,5632.96790595771,1132.1726093210236,0.0,inf,0.17540706055809807,13.86831537607992,,7.0,7.0,7.0,
diff --git a/development/local_documentation/.buildinfo b/development/local_documentation/.buildinfo
diff --git a/development/local_documentation/.doctrees/API reference.doctree b/development/local_documentation/.doctrees/API reference.doctree
diff --git a/development/local_documentation/.doctrees/API/Entities.doctree b/development/local_documentation/.doctrees/API/Entities.doctree
diff --git a/development/local_documentation/.doctrees/API/Entities/Boundaries.doctree b/development/local_documentation/.doctrees/API/Entities/Boundaries.doctree
diff --git a/development/local_documentation/.doctrees/API/Entities/FractureNetwork.doctree b/development/local_documentation/.doctrees/API/Entities/FractureNetwork.doctree
diff --git a/development/local_documentation/.doctrees/API/Entities/Fractures.doctree b/development/local_documentation/.doctrees/API/Entities/Fractures.doctree
diff --git a/development/local_documentation/.doctrees/API/Plotting.doctree b/development/local_documentation/.doctrees/API/Plotting.doctree
diff --git a/development/local_documentation/.doctrees/API/Statistic.doctree b/development/local_documentation/.doctrees/API/Statistic.doctree
diff --git a/development/local_documentation/.doctrees/API/Statistic/NetworkFitter.doctree b/development/local_documentation/.doctrees/API/Statistic/NetworkFitter.doctree
diff --git a/development/local_documentation/.doctrees/Glossary.doctree b/development/local_documentation/.doctrees/Glossary.doctree
diff --git a/development/local_documentation/.doctrees/Introduction to fracture network analysis.doctree b/development/local_documentation/.doctrees/Introduction to fracture network analysis.doctree
diff --git a/development/local_documentation/.doctrees/Quickstart.doctree b/development/local_documentation/.doctrees/Quickstart.doctree
diff --git a/development/local_documentation/.doctrees/Recommended resources.doctree b/development/local_documentation/.doctrees/Recommended resources.doctree
diff --git a/development/local_documentation/.doctrees/Theory reference.doctree b/development/local_documentation/.doctrees/Theory reference.doctree
diff --git a/development/local_documentation/.doctrees/Theory/1. Fracture networks.doctree b/development/local_documentation/.doctrees/Theory/1. Fracture networks.doctree
diff --git a/development/local_documentation/.doctrees/Theory/2. Topology.doctree b/development/local_documentation/.doctrees/Theory/2. Topology.doctree
diff --git a/development/local_documentation/.doctrees/Theory/3. Statistical modelling.doctree b/development/local_documentation/.doctrees/Theory/3. Statistical modelling.doctree
diff --git a/development/local_documentation/.doctrees/Tutorial reference.doctree b/development/local_documentation/.doctrees/Tutorial reference.doctree
diff --git a/...ment/local_documentation/.doctrees/Tutorials/1. Creating a FractureNetwork object.doctree b/...ment/local_documentation/.doctrees/Tutorials/1. Creating a FractureNetwork object.doctree
diff --git a/...ocal_documentation/.doctrees/Tutorials/2. Calculate topology of a FractureNetwork.doctree b/...ocal_documentation/.doctrees/Tutorials/2. Calculate topology of a FractureNetwork.doctree
diff --git a/development/local_documentation/.doctrees/Tutorials/3. Plot a FracAbility entity.doctree b/development/local_documentation/.doctrees/Tutorials/3. Plot a FracAbility entity.doctree
diff --git a/development/local_documentation/.doctrees/environment.pickle b/development/local_documentation/.doctrees/environment.pickle
diff --git a/development/local_documentation/.doctrees/index.doctree b/development/local_documentation/.doctrees/index.doctree