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update README
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gangcai committed Sep 3, 2019
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# ZebEndoimmune
The scripts used to analyze zebrafish endothelial single-cell sequencing data
## use cell ranger to convert raw sequencing data to counts matrix
```bash
bash run_cellranger_batch.sh
```

## run Seurat
```R
Rscript run_seurat3_integrate_sctransform.R
```

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