Merge pull request #690 from martenson/iucup

update iuc tools on main
galaxyproject · Feb 20, 2024 · 969d8a4 · 969d8a4
2 parents 6682e20 + e0bf340
commit 969d8a4
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diff --git a/usegalaxy.org/annotation.yml.lock b/usegalaxy.org/annotation.yml.lock
@@ -75,6 +75,7 @@ tools:
   owner: iuc
   revisions:
   - 239ce9f24386
+  - b982a9ea939c
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: fgsea
@@ -374,6 +375,7 @@ tools:
   owner: iuc
   revisions:
   - 30f08d74024f
+  - 57c6718cbfcc
   - a7ce2601500c
   - b69c46064ec7
   - e94187d661df
@@ -386,6 +388,7 @@ tools:
   - 582fd74dc2a1
   - 756376aeb1ae
   - 9feee7fc49a1
+  - d0336d67702b
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
 - name: funannotate_predict
@@ -420,6 +423,7 @@ tools:
   revisions:
   - 033755194fe9
   - af3c1dc1d141
+  - b815ec682418
   - e95d52d295d7
   tool_panel_section_id: annotation
   tool_panel_section_label: Annotation
diff --git a/usegalaxy.org/assembly.yml.lock b/usegalaxy.org/assembly.yml.lock
@@ -102,6 +102,7 @@ tools:
   - 03fd468e158f
   - 1035adb112c0
   - 1d06c8b38e77
+  - 28189050e437
   - 53c2bc8c2ae3
   - 675ee1aa5952
   - 9e58ff014088
@@ -116,11 +117,13 @@ tools:
   - b65a43f70b99
   - d159735a6a9f
   - d5fb354f745d
+  - de1260f8a300
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: spades_metaplasmidspades
   owner: iuc
   revisions:
+  - 037f9927c4ff
   - 4a01e0d2892c
   - 6b5a5842531e
   - b8002c3f7141
@@ -131,6 +134,7 @@ tools:
   owner: iuc
   revisions:
   - 34305b013402
+  - 9678993ca5bd
   - ad8b536d1caa
   - d6e617c4e338
   - ff41a00a6745
@@ -140,6 +144,7 @@ tools:
   owner: iuc
   revisions:
   - 051fd2db8a27
+  - 604782a8a53a
   - 7490b213baa9
   - 904bf932cf78
   - d89ced9439f3
@@ -151,6 +156,7 @@ tools:
   - 1708851f8804
   - 340bc17f49cf
   - 75405f5e2cc5
+  - 7bb235ff0746
   - 85fb02c43042
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
@@ -159,6 +165,7 @@ tools:
   revisions:
   - 2a10645aeadd
   - 328aa71f0f3c
+  - 5b26685e5d3b
   - 9de69775f512
   - e060c3987513
   tool_panel_section_id: assembly
@@ -249,6 +256,7 @@ tools:
   - 39edec572bae
   - 589078edd230
   - 9d79beb19ac3
+  - d7edbc9c3a07
   - f8113c25bc6b
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
@@ -291,6 +299,7 @@ tools:
   - 02831bf9e95f
   - 2b16ba799da9
   - 511e5e3cd55e
+  - 79b48f02db49
   - 8fef980d48b5
   - dfb8a4497339
   tool_panel_section_id: assembly
@@ -300,6 +309,7 @@ tools:
   revisions:
   - 0a10fddd97d2
   - 44c66e8d21e6
+  - 6c571966cfb9
   - 7c9417381ad5
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
@@ -341,6 +351,7 @@ tools:
   owner: iuc
   revisions:
   - 1b52f0c8ad7f
+  - d6c074a93c51
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: mitohifi

diff --git a/usegalaxy.org/bbtools.yml.lock b/usegalaxy.org/bbtools.yml.lock
@@ -6,36 +6,42 @@ tools:
 - name: bbtools_bbduk
   owner: iuc
   revisions:
+  - 0840ba83860c
   - 159b04e36791
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
 - name: bbtools_bbmap
   owner: iuc
   revisions:
+  - 3171f7f52576
   - 517464809c33
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
 - name: bbtools_bbmerge
   owner: iuc
   revisions:
+  - 6d084528a6f1
   - c05232655d00
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
 - name: bbtools_bbnorm
   owner: iuc
   revisions:
   - 1ef267476a17
+  - a9329b77db78
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
 - name: bbtools_callvariants
   owner: iuc
   revisions:
+  - adec76ebc868
   - ee407fae3ccd
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
 - name: bbtools_tadpole
   owner: iuc
   revisions:
   - 20aef74d20a1
+  - e4fb34b79770
   tool_panel_section_id: bbtools
   tool_panel_section_label: BBTools
diff --git a/usegalaxy.org/fastq_quality_control.yml.lock b/usegalaxy.org/fastq_quality_control.yml.lock
@@ -79,6 +79,7 @@ tools:
   - 819b8c1657d5
   - 89d299153577
   - a252d8415583
+  - c1a33f603da2
   - d77a9c2a242d
   - ecb38e2798cd
   tool_panel_section_id: fastq_quality_control

diff --git a/usegalaxy.org/graph_display_data.yml.lock b/usegalaxy.org/graph_display_data.yml.lock
@@ -147,6 +147,7 @@ tools:
 - name: export2graphlan
   owner: iuc
   revisions:
+  - 635c90a27692
   - b16989c1e3a7
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
@@ -216,6 +217,7 @@ tools:
 - name: graphlan
   owner: iuc
   revisions:
+  - 6e8eb0c0d91f
   - 8f62f666dcb6
   - a490b70e46fc
   tool_panel_section_id: graph_display_data
@@ -224,6 +226,7 @@ tools:
   owner: iuc
   revisions:
   - 5d6f8f0bef7c
+  - 97e3b735ed22
   - cf1df6b2220a
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
@@ -268,6 +271,7 @@ tools:
   revisions:
   - 0a10fddd97d2
   - 44c66e8d21e6
+  - 6c571966cfb9
   - 7c9417381ad5
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data

diff --git a/usegalaxy.org/mapping.yml.lock b/usegalaxy.org/mapping.yml.lock
@@ -106,6 +106,7 @@ tools:
   revisions:
   - 13022c3d3076
   - 178bdbdb6d24
+  - 42ce70172b72
   - 5ef7ec16b04f
   - 79b885ce78d7
   - a6fba3d92531
@@ -134,6 +135,7 @@ tools:
 - name: bbtools_bbmap
   owner: iuc
   revisions:
+  - 3171f7f52576
   - 517464809c33
   - 858a65b52cf9
   - 9ed6579f52f3

diff --git a/usegalaxy.org/metagenomic_analysis.yml.lock b/usegalaxy.org/metagenomic_analysis.yml.lock
@@ -6,6 +6,7 @@ tools:
 - name: kraken2
   owner: iuc
   revisions:
+  - 20e2f64aa1fe
   - 328c607150ff
   - 4a9da2b6c2e3
   - e674066930b2
@@ -90,6 +91,7 @@ tools:
   revisions:
   - 0b3c3ad92827
   - 28ad7ac9c193
+  - 3b6f97e7094c
   - 4a6ee918c13a
   - 6ef0b5664c69
   - a3b86937ead6
@@ -100,6 +102,7 @@ tools:
 - name: biom_convert
   owner: iuc
   revisions:
+  - 091bb5922a82
   - 0de92f0b96ef
   - 1b5fc03380d4
   - 54ccb7e1f49a
@@ -141,13 +144,15 @@ tools:
 - name: cat_add_names
   owner: iuc
   revisions:
+  - 21bf2f07f3f3
   - 8dfc90f35aba
   - acd9fe45eb81
   tool_panel_section_id: metagenomic_analysis
   tool_panel_section_label: Metagenomic Analysis
 - name: cat_prepare
   owner: iuc
   revisions:
+  - 51906c8c692a
   - 8315b5cebb82
   - a40bbd70b8b1
   tool_panel_section_id: metagenomic_analysis
@@ -157,18 +162,21 @@ tools:
   revisions:
   - 7aebc0137f20
   - c6c77d840993
+  - f41dbb0b9ff8
   tool_panel_section_id: metagenomic_analysis
   tool_panel_section_label: Metagenomic Analysis
 - name: cat_summarise
   owner: iuc
   revisions:
   - 388e6678fa98
   - 7f1aaa1932d8
+  - a8216def322b
   tool_panel_section_id: metagenomic_analysis
   tool_panel_section_label: Metagenomic Analysis
 - name: cat_bins
   owner: iuc
   revisions:
+  - 0e63d03c8790
   - 18676df0cb3a
   - 31853794ace2
   tool_panel_section_id: metagenomic_analysis
@@ -434,6 +442,7 @@ tools:
   revisions:
   - 1a6cdf55390f
   - ec368db926f4
+  - fd69c607b43f
   tool_panel_section_id: metagenomic_analysis
   tool_panel_section_label: Metagenomic Analysis
 - name: humann_unpack_pathways

diff --git a/usegalaxy.org/ncbi_blast_.yml.lock b/usegalaxy.org/ncbi_blast_.yml.lock
@@ -17,6 +17,7 @@ tools:
 - name: kraken2
   owner: iuc
   revisions:
+  - 20e2f64aa1fe
   - 328c607150ff
   - 4a9da2b6c2e3
   - e674066930b2

diff --git a/usegalaxy.org/rna_seq.yml.lock b/usegalaxy.org/rna_seq.yml.lock
@@ -7,6 +7,7 @@ tools:
   owner: iuc
   revisions:
   - 0921444c832d
+  - 119b069fc845
   - 58c35179ebf0
   - 708348a17fa1
   - d6f5fa4ee473
@@ -148,6 +149,7 @@ tools:
   - 7ed2edc1337f
   - 850f3679b9b4
   - 980d2a2e1180
+  - b0f2be869d6d
   - b9e04854e2bb
   - c772497b2c32
   - d5659efd66aa