Merge pull request #856 from galaxyproject/create-pull-request/patch

Update all repos 2024-09-30
galaxyproject · Oct 1, 2024 · 6d5bcc7 · 6d5bcc7
2 parents e37a16b + 83368b6
commit 6d5bcc7
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diff --git a/usegalaxy.org/convert_formats.yml.lock b/usegalaxy.org/convert_formats.yml.lock
@@ -237,6 +237,7 @@ tools:
   owner: iuc
   revisions:
   - 65a69de1e294
+  - 8d6686664021
   - a7387ce2a8ca
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
@@ -245,6 +246,7 @@ tools:
   revisions:
   - 6ff67d2860e1
   - def7a82d23e1
+  - f3233d395549
   tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
 - name: ucsc_maftoaxt

diff --git a/usegalaxy.org/data_managers.yml.lock b/usegalaxy.org/data_managers.yml.lock
@@ -117,6 +117,7 @@ tools:
 - name: data_manager_mapseq
   owner: iuc
   revisions:
+  - 23511530b8fd
   - 4cd97cc67061
   - dbf2735e8480
   tool_panel_section_id: data_managers

diff --git a/usegalaxy.org/evolution.yml.lock b/usegalaxy.org/evolution.yml.lock
@@ -34,6 +34,7 @@ tools:
 - name: tn93
   owner: iuc
   revisions:
+  - 2fd21f5b16bc
   - 9d793e88e15f
   - b38f620a3628
   - ccebde0e2d61
@@ -42,6 +43,7 @@ tools:
 - name: tn93_filter
   owner: iuc
   revisions:
+  - 1aa73004ba9b
   - ba95715078c9
   - cf50aeb956f2
   tool_panel_section_id: evolution
@@ -51,6 +53,7 @@ tools:
   revisions:
   - 112d80c9ccca
   - af03f3398f03
+  - eb6f0ec5b95e
   tool_panel_section_id: evolution
   tool_panel_section_label: Evolution
 - name: tn93_readreduce
@@ -59,6 +62,7 @@ tools:
   - 1d2ec0b0a0a7
   - 84849140a3bc
   - bdaadfd0c843
+  - c176164dc8a5
   tool_panel_section_id: evolution
   tool_panel_section_label: Evolution
 - name: tasmanian_mismatch

diff --git a/usegalaxy.org/fasta_fastq.yml.lock b/usegalaxy.org/fasta_fastq.yml.lock
@@ -325,6 +325,7 @@ tools:
   revisions:
   - 276b4111b253
   - 8250ea3a1501
+  - 9570563fb686
   - a535cf1e5da4
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
@@ -358,6 +359,7 @@ tools:
 - name: umi_tools_extract
   owner: iuc
   revisions:
+  - 015cf18f4a15
   - 6a675c3aa610
   - 9fa7803d1c51
   - f3759eec3018
@@ -366,18 +368,21 @@ tools:
 - name: umi_tools_whitelist
   owner: iuc
   revisions:
+  - 4c8a1c7d3608
   - 953b4821b183
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: umi_tools_dedup
   owner: iuc
   revisions:
+  - 04e09969d376
   - f1d33e4c7bd8
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: umi_tools_group
   owner: iuc
   revisions:
+  - 257be15474a7
   - d6255614afd7
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ

diff --git a/usegalaxy.org/filter_and_sort.yml.lock b/usegalaxy.org/filter_and_sort.yml.lock
@@ -7,6 +7,7 @@ tools:
   owner: iuc
   revisions:
   - 00b3da7776a0
+  - 2488bcddaf14
   - 61946b8bd43b
   tool_panel_section_id: filter_and_sort
   tool_panel_section_label: Filter and Sort

diff --git a/usegalaxy.org/graph_display_data.yml.lock b/usegalaxy.org/graph_display_data.yml.lock
@@ -164,6 +164,7 @@ tools:
   owner: iuc
   revisions:
   - 10515715c940
+  - 1a72f938213e
   - 3d059e9c2fba
   - a4d83ba2a1bc
   - d3a9e32672ec
@@ -178,6 +179,7 @@ tools:
   - 355a82227003
   - 497d700a5229
   - 536078949ae4
+  - 6fc8bab811da
   - b0d96516e6a5
   - fb50ab943396
   tool_panel_section_id: graph_display_data
@@ -189,6 +191,7 @@ tools:
   - 2bf238af068d
   - 7f2ef7216cf8
   - 90928b255abb
+  - ae344ccf9d62
   - b1268b7544d3
   - fcb6a19960c6
   tool_panel_section_id: graph_display_data
@@ -199,6 +202,7 @@ tools:
   - 1acf88921176
   - 299307abd804
   - 3b12bf9b4b87
+  - 5298e06f14f9
   - 5fe1dc76176e
   - 87908c76ca8d
   - 9cec81e1b90e
@@ -210,6 +214,7 @@ tools:
   owner: iuc
   revisions:
   - 0e7290688b50
+  - 17b666467c32
   - 637cf21db396
   - 9c52a8130729
   - d6c41b454cc1

diff --git a/usegalaxy.org/mapping.yml.lock b/usegalaxy.org/mapping.yml.lock
@@ -215,6 +215,7 @@ tools:
   owner: iuc
   revisions:
   - 5815f5bd9ac8
+  - c953dbade109
   - fff37ce2d95d
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping

diff --git a/usegalaxy.org/metagenomic_analysis.yml.lock b/usegalaxy.org/metagenomic_analysis.yml.lock
@@ -558,6 +558,7 @@ tools:
 - name: recentrifuge
   owner: iuc
   revisions:
+  - 591175c0f051
   - 76bf12b928f4
   - d4fbfd31696c
   tool_panel_section_id: metagenomic_analysis

diff --git a/usegalaxy.org/rna_seq.yml.lock b/usegalaxy.org/rna_seq.yml.lock
@@ -436,6 +436,7 @@ tools:
 - name: tximport
   owner: iuc
   revisions:
+  - 0bcc35b10569
   - 1906cb429215
   - 206a71a69161
   tool_panel_section_id: rna_seq

diff --git a/usegalaxy.org/single_cell.yml.lock b/usegalaxy.org/single_cell.yml.lock
@@ -501,12 +501,14 @@ tools:
 - name: sinto_barcode
   owner: iuc
   revisions:
+  - d0f56ac6bb60
   - d1b34ac42b8f
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: sinto_fragments
   owner: iuc
   revisions:
+  - 03a04f48b922
   - 29e6bfb2cf49
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell

diff --git a/usegalaxy.org/training_metabolomics.yml.lock b/usegalaxy.org/training_metabolomics.yml.lock
@@ -114,6 +114,7 @@ tools:
 - name: camera_annotate
   owner: lecorguille
   revisions:
+  - 3d63a762954a
   - 4b9ab71be05e
   - 512c2b701d96
   tool_panel_section_id: metabolomics

diff --git a/usegalaxy.org/variant_calling.yml.lock b/usegalaxy.org/variant_calling.yml.lock
@@ -24,6 +24,7 @@ tools:
   - 268d162b9c49
   - 5b80f544c67f
   - 5c7b70713fb5
+  - 6322be79bd8e
   - 74aebe30fb52
   - 9473cd297a76
   - cfcf33df7fc0
@@ -253,6 +254,7 @@ tools:
   owner: iuc
   revisions:
   - 09f5c6f3088a
+  - 43fffeed243f
   - 93c4b04a0769
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling